Protein–RNA interactions for Protein: P60953

CDC42, Cell division control protein 42 homolog, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42P60953 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CDC42P60953 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CDC42P60953 DYM-203ENST00000442713 2147 ntTSL 2 BASIC19.4■□□□□ 0.7
CDC42P60953 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CDC42P60953 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
CDC42P60953 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CDC42P60953 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC19.4■□□□□ 0.7
CDC42P60953 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CDC42P60953 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CDC42P60953 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
CDC42P60953 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC19.4■□□□□ 0.7
CDC42P60953 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CDC42P60953 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
CDC42P60953 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC19.4■□□□□ 0.7
CDC42P60953 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
CDC42P60953 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
CDC42P60953 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC19.4■□□□□ 0.7
CDC42P60953 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
CDC42P60953 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CDC42P60953 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CDC42P60953 USP45-205ENST00000472914 1617 ntTSL 5 BASIC19.4■□□□□ 0.7
CDC42P60953 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
CDC42P60953 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
CDC42P60953 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC19.39■□□□□ 0.7
CDC42P60953 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.7
CDC42P60953 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CDC42P60953 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC19.39■□□□□ 0.69
CDC42P60953 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC19.39■□□□□ 0.69
CDC42P60953 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
CDC42P60953 FEM1AP1-201ENST00000431297 1995 ntBASIC19.39■□□□□ 0.69
CDC42P60953 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
CDC42P60953 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CDC42P60953 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
CDC42P60953 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CDC42P60953 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CDC42P60953 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CDC42P60953 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CDC42P60953 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
CDC42P60953 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
CDC42P60953 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
CDC42P60953 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CDC42P60953 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC19.38■□□□□ 0.69
CDC42P60953 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC19.38■□□□□ 0.69
CDC42P60953 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC19.38■□□□□ 0.69
CDC42P60953 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CDC42P60953 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC19.38■□□□□ 0.69
CDC42P60953 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC19.38■□□□□ 0.69
CDC42P60953 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC19.38■□□□□ 0.69
CDC42P60953 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC19.38■□□□□ 0.69
CDC42P60953 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC19.38■□□□□ 0.69
CDC42P60953 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
CDC42P60953 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
CDC42P60953 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
CDC42P60953 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
CDC42P60953 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CDC42P60953 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC19.37■□□□□ 0.69
CDC42P60953 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CDC42P60953 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CDC42P60953 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CDC42P60953 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CDC42P60953 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CDC42P60953 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC19.37■□□□□ 0.69
CDC42P60953 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CDC42P60953 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CDC42P60953 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CDC42P60953 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CDC42P60953 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CDC42P60953 AL049796.1-201ENST00000565336 1766 ntBASIC19.37■□□□□ 0.69
CDC42P60953 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
CDC42P60953 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CDC42P60953 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CDC42P60953 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC19.36■□□□□ 0.69
CDC42P60953 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CDC42P60953 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CDC42P60953 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CDC42P60953 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CDC42P60953 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC19.36■□□□□ 0.69
CDC42P60953 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
CDC42P60953 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC19.36■□□□□ 0.69
CDC42P60953 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC19.36■□□□□ 0.69
CDC42P60953 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC19.36■□□□□ 0.69
CDC42P60953 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CDC42P60953 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
CDC42P60953 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CDC42P60953 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC19.36■□□□□ 0.69
CDC42P60953 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CDC42P60953 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC19.35■□□□□ 0.69
CDC42P60953 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
CDC42P60953 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC19.35■□□□□ 0.69
CDC42P60953 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CDC42P60953 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CDC42P60953 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC19.35■□□□□ 0.69
CDC42P60953 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
CDC42P60953 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
CDC42P60953 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CDC42P60953 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CDC42P60953 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC19.35■□□□□ 0.69
CDC42P60953 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
CDC42P60953 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
CDC42P60953 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms