Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC19.44■□□□□ 0.7
CLDN20P56880 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CLDN20P56880 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CLDN20P56880 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
CLDN20P56880 MIR5787-201ENST00000611784 55 ntBASIC19.44■□□□□ 0.7
CLDN20P56880 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CLDN20P56880 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CLDN20P56880 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CLDN20P56880 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CLDN20P56880 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
CLDN20P56880 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CLDN20P56880 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
CLDN20P56880 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
CLDN20P56880 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CLDN20P56880 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CLDN20P56880 OR7E47P-201ENST00000546390 1422 ntBASIC19.43■□□□□ 0.7
CLDN20P56880 AC139530.1-201ENST00000575312 1977 ntBASIC19.43■□□□□ 0.7
CLDN20P56880 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
CLDN20P56880 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CLDN20P56880 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC19.43■□□□□ 0.7
CLDN20P56880 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC19.43■□□□□ 0.7
CLDN20P56880 TPRG1LP1-201ENST00000598702 760 ntBASIC19.43■□□□□ 0.7
CLDN20P56880 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC19.43■□□□□ 0.7
CLDN20P56880 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
CLDN20P56880 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC19.43■□□□□ 0.7
CLDN20P56880 LINC02228-203ENST00000641970 1355 ntBASIC19.43■□□□□ 0.7
CLDN20P56880 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC19.42■□□□□ 0.7
CLDN20P56880 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
CLDN20P56880 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC19.42■□□□□ 0.7
CLDN20P56880 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC19.42■□□□□ 0.7
CLDN20P56880 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CLDN20P56880 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CLDN20P56880 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC19.42■□□□□ 0.7
CLDN20P56880 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
CLDN20P56880 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC19.42■□□□□ 0.7
CLDN20P56880 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CLDN20P56880 HACD1-201ENST00000326961 773 ntTSL 2 BASIC19.42■□□□□ 0.7
CLDN20P56880 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC19.42■□□□□ 0.7
CLDN20P56880 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CLDN20P56880 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC19.42■□□□□ 0.7
CLDN20P56880 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
CLDN20P56880 AC080038.3-201ENST00000623346 1952 ntBASIC19.42■□□□□ 0.7
CLDN20P56880 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CLDN20P56880 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CLDN20P56880 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
CLDN20P56880 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
CLDN20P56880 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CLDN20P56880 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CLDN20P56880 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CLDN20P56880 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CLDN20P56880 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
CLDN20P56880 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CLDN20P56880 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
CLDN20P56880 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
CLDN20P56880 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
CLDN20P56880 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CLDN20P56880 CCDC92B-201ENST00000575506 885 ntBASIC19.41■□□□□ 0.7
CLDN20P56880 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC19.41■□□□□ 0.7
CLDN20P56880 ANKRD20A6P-201ENST00000618763 204 ntBASIC19.41■□□□□ 0.7
CLDN20P56880 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
CLDN20P56880 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
CLDN20P56880 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CLDN20P56880 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CLDN20P56880 FBXW4P1-201ENST00000426721 2239 ntBASIC19.41■□□□□ 0.7
CLDN20P56880 C11orf96-202ENST00000528572 1834 ntBASIC19.41■□□□□ 0.7
CLDN20P56880 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CLDN20P56880 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CLDN20P56880 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CLDN20P56880 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CLDN20P56880 AC092667.1-201ENST00000434301 2586 ntBASIC19.4■□□□□ 0.7
CLDN20P56880 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC19.4■□□□□ 0.7
CLDN20P56880 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC19.4■□□□□ 0.7
CLDN20P56880 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CLDN20P56880 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CLDN20P56880 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CLDN20P56880 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CLDN20P56880 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CLDN20P56880 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
CLDN20P56880 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
CLDN20P56880 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
CLDN20P56880 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CLDN20P56880 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CLDN20P56880 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC19.4■□□□□ 0.7
CLDN20P56880 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CLDN20P56880 DUX4L2-201ENST00000561772 1275 ntBASIC19.4■□□□□ 0.7
CLDN20P56880 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC19.4■□□□□ 0.7
CLDN20P56880 DUX4L6-201ENST00000626483 1275 ntBASIC19.4■□□□□ 0.7
CLDN20P56880 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CLDN20P56880 DUX4L1-201ENST00000627662 1275 ntBASIC19.4■□□□□ 0.7
CLDN20P56880 DUX4L8-201ENST00000629013 1275 ntBASIC19.4■□□□□ 0.7
CLDN20P56880 DUX4L3-201ENST00000630187 1275 ntBASIC19.4■□□□□ 0.7
CLDN20P56880 DUX4L7-201ENST00000630678 1275 ntBASIC19.4■□□□□ 0.7
CLDN20P56880 DUX4L5-201ENST00000630834 1275 ntBASIC19.4■□□□□ 0.7
CLDN20P56880 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC19.4■□□□□ 0.7
CLDN20P56880 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CLDN20P56880 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
CLDN20P56880 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CLDN20P56880 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CLDN20P56880 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CLDN20P56880 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms