Protein–RNA interactions for Protein: P56856

CLDN18, Claudin-18, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN18P56856 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
CLDN18P56856 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
CLDN18P56856 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC19.06■□□□□ 0.64
CLDN18P56856 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CLDN18P56856 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
CLDN18P56856 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC19.06■□□□□ 0.64
CLDN18P56856 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CLDN18P56856 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CLDN18P56856 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CLDN18P56856 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC19.06■□□□□ 0.64
CLDN18P56856 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC19.06■□□□□ 0.64
CLDN18P56856 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CLDN18P56856 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CLDN18P56856 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CLDN18P56856 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CLDN18P56856 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC19.06■□□□□ 0.64
CLDN18P56856 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC19.06■□□□□ 0.64
CLDN18P56856 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC19.06■□□□□ 0.64
CLDN18P56856 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC19.06■□□□□ 0.64
CLDN18P56856 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CLDN18P56856 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC19.06■□□□□ 0.64
CLDN18P56856 AC080038.1-201ENST00000611274 1154 ntBASIC19.06■□□□□ 0.64
CLDN18P56856 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CLDN18P56856 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC19.06■□□□□ 0.64
CLDN18P56856 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC19.06■□□□□ 0.64
CLDN18P56856 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC19.06■□□□□ 0.64
CLDN18P56856 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CLDN18P56856 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC19.06■□□□□ 0.64
CLDN18P56856 AC026471.6-201ENST00000622954 1905 ntBASIC19.06■□□□□ 0.64
CLDN18P56856 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
CLDN18P56856 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC19.05■□□□□ 0.64
CLDN18P56856 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC19.05■□□□□ 0.64
CLDN18P56856 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CLDN18P56856 FAM99A-202ENST00000538190 1989 ntBASIC19.05■□□□□ 0.64
CLDN18P56856 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CLDN18P56856 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CLDN18P56856 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CLDN18P56856 UBE2DNL-204ENST00000602536 740 ntBASIC19.05■□□□□ 0.64
CLDN18P56856 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC19.05■□□□□ 0.64
CLDN18P56856 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CLDN18P56856 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CLDN18P56856 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
CLDN18P56856 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CLDN18P56856 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CLDN18P56856 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CLDN18P56856 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CLDN18P56856 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
CLDN18P56856 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CLDN18P56856 RNF146-206ENST00000480444 843 ntTSL 2 BASIC19.04■□□□□ 0.64
CLDN18P56856 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC19.04■□□□□ 0.64
CLDN18P56856 TFG-210ENST00000620299 1289 ntTSL 5 BASIC19.04■□□□□ 0.64
CLDN18P56856 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CLDN18P56856 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CLDN18P56856 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CLDN18P56856 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CLDN18P56856 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CLDN18P56856 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CLDN18P56856 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC19.03■□□□□ 0.64
CLDN18P56856 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CLDN18P56856 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CLDN18P56856 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CLDN18P56856 PARP1-202ENST00000366792 553 ntTSL 3 BASIC19.03■□□□□ 0.64
CLDN18P56856 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC19.03■□□□□ 0.64
CLDN18P56856 KRT18P20-201ENST00000548986 1279 ntBASIC19.03■□□□□ 0.64
CLDN18P56856 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC19.03■□□□□ 0.64
CLDN18P56856 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC19.03■□□□□ 0.64
CLDN18P56856 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CLDN18P56856 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC19.03■□□□□ 0.64
CLDN18P56856 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CLDN18P56856 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CLDN18P56856 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CLDN18P56856 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CLDN18P56856 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CLDN18P56856 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
CLDN18P56856 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CLDN18P56856 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
CLDN18P56856 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CLDN18P56856 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
CLDN18P56856 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CLDN18P56856 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CLDN18P56856 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC19.02■□□□□ 0.64
CLDN18P56856 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC19.02■□□□□ 0.64
CLDN18P56856 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC19.02■□□□□ 0.64
CLDN18P56856 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC19.02■□□□□ 0.64
CLDN18P56856 MFSD11-216ENST00000590393 1141 ntBASIC19.02■□□□□ 0.64
CLDN18P56856 AC011767.1-201ENST00000617410 1153 ntBASIC19.02■□□□□ 0.64
CLDN18P56856 AC073111.5-205ENST00000641717 521 ntBASIC19.02■□□□□ 0.64
CLDN18P56856 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
CLDN18P56856 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.63
CLDN18P56856 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.63
CLDN18P56856 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC19.01■□□□□ 0.63
CLDN18P56856 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC19.01■□□□□ 0.63
CLDN18P56856 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CLDN18P56856 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CLDN18P56856 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC19.01■□□□□ 0.63
CLDN18P56856 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CLDN18P56856 NAA20-201ENST00000310450 920 ntTSL 2 BASIC19.01■□□□□ 0.63
CLDN18P56856 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC19.01■□□□□ 0.63
CLDN18P56856 CDCA4P2-201ENST00000441182 718 ntBASIC19.01■□□□□ 0.63
CLDN18P56856 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC19.01■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 49.7 ms