Protein–RNA interactions for Protein: P56704

WNT3A, Protein Wnt-3a, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
WNT3AP56704 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
WNT3AP56704 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
WNT3AP56704 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
WNT3AP56704 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
WNT3AP56704 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
WNT3AP56704 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
WNT3AP56704 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
WNT3AP56704 ZNRF2P3-201ENST00000424200 374 ntBASIC21.52■■□□□ 1.04
WNT3AP56704 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC21.52■■□□□ 1.04
WNT3AP56704 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
WNT3AP56704 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
WNT3AP56704 TPRG1LP1-201ENST00000598702 760 ntBASIC21.52■■□□□ 1.04
WNT3AP56704 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC21.52■■□□□ 1.04
WNT3AP56704 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC21.52■■□□□ 1.04
WNT3AP56704 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC21.52■■□□□ 1.04
WNT3AP56704 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
WNT3AP56704 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
WNT3AP56704 CLDN5-201ENST00000403084 2357 ntBASIC21.52■■□□□ 1.04
WNT3AP56704 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
WNT3AP56704 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
WNT3AP56704 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
WNT3AP56704 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
WNT3AP56704 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
WNT3AP56704 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC21.51■■□□□ 1.03
WNT3AP56704 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
WNT3AP56704 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
WNT3AP56704 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC21.51■■□□□ 1.03
WNT3AP56704 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
WNT3AP56704 AC007375.3-201ENST00000600936 2314 ntBASIC21.51■■□□□ 1.03
WNT3AP56704 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
WNT3AP56704 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC21.51■■□□□ 1.03
WNT3AP56704 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
WNT3AP56704 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
WNT3AP56704 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
WNT3AP56704 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
WNT3AP56704 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
WNT3AP56704 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
WNT3AP56704 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC21.5■■□□□ 1.03
WNT3AP56704 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC21.5■■□□□ 1.03
WNT3AP56704 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC21.5■■□□□ 1.03
WNT3AP56704 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC21.5■■□□□ 1.03
WNT3AP56704 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
WNT3AP56704 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC21.49■■□□□ 1.03
WNT3AP56704 MFF-203ENST00000349901 1716 ntTSL 2 BASIC21.49■■□□□ 1.03
WNT3AP56704 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
WNT3AP56704 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
WNT3AP56704 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
WNT3AP56704 JTB-203ENST00000368589 1216 ntTSL 2 BASIC21.49■■□□□ 1.03
WNT3AP56704 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
WNT3AP56704 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC21.49■■□□□ 1.03
WNT3AP56704 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
WNT3AP56704 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
WNT3AP56704 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC21.49■■□□□ 1.03
WNT3AP56704 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC21.49■■□□□ 1.03
WNT3AP56704 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
WNT3AP56704 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC21.49■■□□□ 1.03
WNT3AP56704 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
WNT3AP56704 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
WNT3AP56704 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
WNT3AP56704 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
WNT3AP56704 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
WNT3AP56704 AC027612.3-201ENST00000413684 1047 ntBASIC21.48■■□□□ 1.03
WNT3AP56704 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
WNT3AP56704 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC21.48■■□□□ 1.03
WNT3AP56704 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC21.48■■□□□ 1.03
WNT3AP56704 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
WNT3AP56704 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC21.48■■□□□ 1.03
WNT3AP56704 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC21.48■■□□□ 1.03
WNT3AP56704 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
WNT3AP56704 Z98882.1-201ENST00000622160 2253 ntBASIC21.48■■□□□ 1.03
WNT3AP56704 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
WNT3AP56704 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
WNT3AP56704 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
WNT3AP56704 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
WNT3AP56704 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC21.47■■□□□ 1.03
WNT3AP56704 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC21.47■■□□□ 1.03
WNT3AP56704 AK1-201ENST00000223836 736 ntTSL 3 BASIC21.47■■□□□ 1.03
WNT3AP56704 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
WNT3AP56704 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
WNT3AP56704 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC21.47■■□□□ 1.03
WNT3AP56704 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
WNT3AP56704 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
WNT3AP56704 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC21.47■■□□□ 1.03
WNT3AP56704 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC21.47■■□□□ 1.03
WNT3AP56704 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC21.47■■□□□ 1.03
WNT3AP56704 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
WNT3AP56704 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
WNT3AP56704 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
WNT3AP56704 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
WNT3AP56704 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
WNT3AP56704 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
WNT3AP56704 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
WNT3AP56704 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
WNT3AP56704 AC026310.3-201ENST00000625186 2373 ntBASIC21.46■■□□□ 1.03
WNT3AP56704 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
WNT3AP56704 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
WNT3AP56704 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC21.46■■□□□ 1.03
WNT3AP56704 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
WNT3AP56704 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
WNT3AP56704 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC21.45■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms