Protein–RNA interactions for Protein: P55771

PAX9, Paired box protein Pax-9, humanhuman

Predictions only

Length 341 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAX9P55771 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC17.08■□□□□ 0.32
PAX9P55771 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PAX9P55771 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PAX9P55771 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC17.08■□□□□ 0.32
PAX9P55771 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC17.08■□□□□ 0.32
PAX9P55771 AP005212.1-201ENST00000581547 1997 ntBASIC17.08■□□□□ 0.32
PAX9P55771 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PAX9P55771 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC17.07■□□□□ 0.32
PAX9P55771 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PAX9P55771 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC17.07■□□□□ 0.32
PAX9P55771 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC17.07■□□□□ 0.32
PAX9P55771 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PAX9P55771 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC17.07■□□□□ 0.32
PAX9P55771 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PAX9P55771 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC17.07■□□□□ 0.32
PAX9P55771 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC17.07■□□□□ 0.32
PAX9P55771 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PAX9P55771 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC17.07■□□□□ 0.32
PAX9P55771 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
PAX9P55771 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
PAX9P55771 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC17.06■□□□□ 0.32
PAX9P55771 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
PAX9P55771 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC17.06■□□□□ 0.32
PAX9P55771 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC17.06■□□□□ 0.32
PAX9P55771 KRT8P33-201ENST00000508125 1423 ntBASIC17.06■□□□□ 0.32
PAX9P55771 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PAX9P55771 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC17.06■□□□□ 0.32
PAX9P55771 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC17.06■□□□□ 0.32
PAX9P55771 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
PAX9P55771 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC17.06■□□□□ 0.32
PAX9P55771 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC17.06■□□□□ 0.32
PAX9P55771 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC17.06■□□□□ 0.32
PAX9P55771 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PAX9P55771 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC17.06■□□□□ 0.32
PAX9P55771 AC073314.1-201ENST00000568729 2216 ntBASIC17.06■□□□□ 0.32
PAX9P55771 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PAX9P55771 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PAX9P55771 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
PAX9P55771 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC17.06■□□□□ 0.32
PAX9P55771 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC17.06■□□□□ 0.32
PAX9P55771 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC17.06■□□□□ 0.32
PAX9P55771 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PAX9P55771 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PAX9P55771 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
PAX9P55771 GTSE1-AS1-202ENST00000623117 1518 ntBASIC17.06■□□□□ 0.32
PAX9P55771 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PAX9P55771 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PAX9P55771 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC17.06■□□□□ 0.32
PAX9P55771 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
PAX9P55771 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC17.05■□□□□ 0.32
PAX9P55771 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
PAX9P55771 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
PAX9P55771 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
PAX9P55771 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC17.05■□□□□ 0.32
PAX9P55771 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC17.05■□□□□ 0.32
PAX9P55771 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC17.05■□□□□ 0.32
PAX9P55771 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC17.05■□□□□ 0.32
PAX9P55771 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
PAX9P55771 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PAX9P55771 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC17.05■□□□□ 0.32
PAX9P55771 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PAX9P55771 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC17.05■□□□□ 0.32
PAX9P55771 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PAX9P55771 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC17.05■□□□□ 0.32
PAX9P55771 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC17.05■□□□□ 0.32
PAX9P55771 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
PAX9P55771 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PAX9P55771 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PAX9P55771 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PAX9P55771 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PAX9P55771 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PAX9P55771 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PAX9P55771 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PAX9P55771 HES6-204ENST00000409182 863 ntTSL 2 BASIC17.04■□□□□ 0.32
PAX9P55771 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC17.04■□□□□ 0.32
PAX9P55771 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC17.04■□□□□ 0.32
PAX9P55771 AL031848.2-201ENST00000607670 837 ntBASIC17.04■□□□□ 0.32
PAX9P55771 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PAX9P55771 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC17.04■□□□□ 0.32
PAX9P55771 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
PAX9P55771 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PAX9P55771 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
PAX9P55771 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PAX9P55771 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PAX9P55771 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PAX9P55771 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PAX9P55771 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC17.03■□□□□ 0.32
PAX9P55771 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PAX9P55771 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC17.03■□□□□ 0.32
PAX9P55771 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC17.03■□□□□ 0.32
PAX9P55771 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
PAX9P55771 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
PAX9P55771 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
PAX9P55771 AL451085.2-201ENST00000605085 799 ntBASIC17.03■□□□□ 0.32
PAX9P55771 AC092028.1-203ENST00000608262 953 ntBASIC17.03■□□□□ 0.32
PAX9P55771 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC17.03■□□□□ 0.32
PAX9P55771 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
PAX9P55771 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
PAX9P55771 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
PAX9P55771 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms