Protein–RNA interactions for Protein: P53667

LIMK1, LIM domain kinase 1, humanhuman

Predictions only

Length 647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1P53667 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC21.1■□□□□ 0.97
LIMK1P53667 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC21.1■□□□□ 0.97
LIMK1P53667 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC21.1■□□□□ 0.97
LIMK1P53667 AC138907.5-202ENST00000569484 235 ntBASIC21.1■□□□□ 0.97
LIMK1P53667 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
LIMK1P53667 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
LIMK1P53667 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
LIMK1P53667 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
LIMK1P53667 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
LIMK1P53667 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
LIMK1P53667 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
LIMK1P53667 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
LIMK1P53667 C9orf163-202ENST00000624034 2573 ntBASIC21.09■□□□□ 0.97
LIMK1P53667 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
LIMK1P53667 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
LIMK1P53667 USP45-205ENST00000472914 1617 ntTSL 5 BASIC21.09■□□□□ 0.97
LIMK1P53667 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
LIMK1P53667 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC21.09■□□□□ 0.97
LIMK1P53667 UQCRFS1P1-201ENST00000435169 820 ntBASIC21.09■□□□□ 0.97
LIMK1P53667 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC21.09■□□□□ 0.97
LIMK1P53667 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC21.09■□□□□ 0.97
LIMK1P53667 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC21.09■□□□□ 0.97
LIMK1P53667 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC21.09■□□□□ 0.97
LIMK1P53667 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
LIMK1P53667 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
LIMK1P53667 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
LIMK1P53667 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
LIMK1P53667 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
LIMK1P53667 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
LIMK1P53667 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
LIMK1P53667 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
LIMK1P53667 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
LIMK1P53667 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC21.08■□□□□ 0.97
LIMK1P53667 AC008550.1-201ENST00000511500 884 ntBASIC21.08■□□□□ 0.97
LIMK1P53667 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC21.08■□□□□ 0.97
LIMK1P53667 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
LIMK1P53667 AC008694.1-202ENST00000636953 945 ntBASIC21.08■□□□□ 0.97
LIMK1P53667 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
LIMK1P53667 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC21.07■□□□□ 0.96
LIMK1P53667 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC21.07■□□□□ 0.96
LIMK1P53667 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC21.07■□□□□ 0.96
LIMK1P53667 AC069236.1-201ENST00000604339 616 ntBASIC21.07■□□□□ 0.96
LIMK1P53667 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
LIMK1P53667 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC21.07■□□□□ 0.96
LIMK1P53667 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
LIMK1P53667 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC21.07■□□□□ 0.96
LIMK1P53667 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
LIMK1P53667 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
LIMK1P53667 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
LIMK1P53667 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
LIMK1P53667 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC21.06■□□□□ 0.96
LIMK1P53667 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC21.06■□□□□ 0.96
LIMK1P53667 BMP1-204ENST00000397814 836 ntTSL 4 BASIC21.06■□□□□ 0.96
LIMK1P53667 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
LIMK1P53667 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
LIMK1P53667 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC21.06■□□□□ 0.96
LIMK1P53667 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
LIMK1P53667 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC21.06■□□□□ 0.96
LIMK1P53667 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC21.06■□□□□ 0.96
LIMK1P53667 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
LIMK1P53667 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC21.06■□□□□ 0.96
LIMK1P53667 USP36-216ENST00000589424 970 ntTSL 5 BASIC21.06■□□□□ 0.96
LIMK1P53667 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC21.06■□□□□ 0.96
LIMK1P53667 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC21.06■□□□□ 0.96
LIMK1P53667 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC21.06■□□□□ 0.96
LIMK1P53667 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC21.06■□□□□ 0.96
LIMK1P53667 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC21.06■□□□□ 0.96
LIMK1P53667 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
LIMK1P53667 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
LIMK1P53667 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
LIMK1P53667 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
LIMK1P53667 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC21.05■□□□□ 0.96
LIMK1P53667 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
LIMK1P53667 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
LIMK1P53667 MIR1224-201ENST00000408193 85 ntBASIC21.05■□□□□ 0.96
LIMK1P53667 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC21.05■□□□□ 0.96
LIMK1P53667 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
LIMK1P53667 NFE2L3P1-201ENST00000588207 1959 ntBASIC21.05■□□□□ 0.96
LIMK1P53667 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
LIMK1P53667 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC21.04■□□□□ 0.96
LIMK1P53667 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
LIMK1P53667 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
LIMK1P53667 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
LIMK1P53667 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
LIMK1P53667 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC21.04■□□□□ 0.96
LIMK1P53667 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
LIMK1P53667 BX276092.2-201ENST00000417668 665 ntBASIC21.04■□□□□ 0.96
LIMK1P53667 FAM210CP-201ENST00000445714 574 ntBASIC21.04■□□□□ 0.96
LIMK1P53667 UBE2SP1-201ENST00000450587 669 ntBASIC21.04■□□□□ 0.96
LIMK1P53667 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC21.04■□□□□ 0.96
LIMK1P53667 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC21.04■□□□□ 0.96
LIMK1P53667 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC21.04■□□□□ 0.96
LIMK1P53667 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC21.04■□□□□ 0.96
LIMK1P53667 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
LIMK1P53667 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
LIMK1P53667 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
LIMK1P53667 AL117328.2-201ENST00000624617 1940 ntBASIC21.04■□□□□ 0.96
LIMK1P53667 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
LIMK1P53667 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC21.04■□□□□ 0.96
LIMK1P53667 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 16 ms