Protein–RNA interactions for Protein: P51610

HCFC1, Host cell factor 1, humanhuman

Predictions only

Length 2,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1P51610 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HCFC1P51610 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HCFC1P51610 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC18.64■□□□□ 0.57
HCFC1P51610 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HCFC1P51610 NFE2L3P1-201ENST00000588207 1959 ntBASIC18.64■□□□□ 0.57
HCFC1P51610 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
HCFC1P51610 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
HCFC1P51610 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
HCFC1P51610 ME2-208ENST00000638937 2471 ntTSL 5 BASIC18.64■□□□□ 0.57
HCFC1P51610 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC18.64■□□□□ 0.57
HCFC1P51610 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC18.64■□□□□ 0.57
HCFC1P51610 OR10C1-204ENST00000622521 1039 ntBASIC18.64■□□□□ 0.57
HCFC1P51610 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
HCFC1P51610 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
HCFC1P51610 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HCFC1P51610 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
HCFC1P51610 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
HCFC1P51610 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC18.63■□□□□ 0.57
HCFC1P51610 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC18.63■□□□□ 0.57
HCFC1P51610 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
HCFC1P51610 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
HCFC1P51610 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
HCFC1P51610 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
HCFC1P51610 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC18.63■□□□□ 0.57
HCFC1P51610 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
HCFC1P51610 PLLP-204ENST00000569059 665 ntTSL 3 BASIC18.63■□□□□ 0.57
HCFC1P51610 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC18.63■□□□□ 0.57
HCFC1P51610 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
HCFC1P51610 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
HCFC1P51610 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
HCFC1P51610 ANOS2P-203ENST00000472227 1816 ntBASIC18.63■□□□□ 0.57
HCFC1P51610 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
HCFC1P51610 AL512625.2-201ENST00000417533 625 ntBASIC18.62■□□□□ 0.57
HCFC1P51610 BX276092.2-201ENST00000417668 665 ntBASIC18.62■□□□□ 0.57
HCFC1P51610 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC18.62■□□□□ 0.57
HCFC1P51610 TERF1P5-201ENST00000477545 1207 ntBASIC18.62■□□□□ 0.57
HCFC1P51610 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
HCFC1P51610 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC18.62■□□□□ 0.57
HCFC1P51610 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC18.62■□□□□ 0.57
HCFC1P51610 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
HCFC1P51610 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
HCFC1P51610 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC18.62■□□□□ 0.57
HCFC1P51610 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC18.62■□□□□ 0.57
HCFC1P51610 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
HCFC1P51610 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
HCFC1P51610 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
HCFC1P51610 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
HCFC1P51610 DUSP5P2-201ENST00000426873 1033 ntBASIC18.62■□□□□ 0.57
HCFC1P51610 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC18.62■□□□□ 0.57
HCFC1P51610 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC18.62■□□□□ 0.57
HCFC1P51610 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
HCFC1P51610 MYC-209ENST00000641252 345 ntBASIC18.62■□□□□ 0.57
HCFC1P51610 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
HCFC1P51610 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
HCFC1P51610 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
HCFC1P51610 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
HCFC1P51610 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HCFC1P51610 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HCFC1P51610 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC18.61■□□□□ 0.57
HCFC1P51610 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
HCFC1P51610 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC18.61■□□□□ 0.57
HCFC1P51610 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC18.61■□□□□ 0.57
HCFC1P51610 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
HCFC1P51610 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC18.61■□□□□ 0.57
HCFC1P51610 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
HCFC1P51610 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
HCFC1P51610 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
HCFC1P51610 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HCFC1P51610 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC18.61■□□□□ 0.57
HCFC1P51610 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC18.61■□□□□ 0.57
HCFC1P51610 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
HCFC1P51610 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
HCFC1P51610 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC18.61■□□□□ 0.57
HCFC1P51610 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC18.61■□□□□ 0.57
HCFC1P51610 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC18.61■□□□□ 0.57
HCFC1P51610 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HCFC1P51610 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
HCFC1P51610 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC18.6■□□□□ 0.57
HCFC1P51610 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC18.6■□□□□ 0.57
HCFC1P51610 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
HCFC1P51610 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
HCFC1P51610 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
HCFC1P51610 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC18.6■□□□□ 0.57
HCFC1P51610 PRORSD1P-201ENST00000295112 541 ntBASIC18.6■□□□□ 0.57
HCFC1P51610 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
HCFC1P51610 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC18.6■□□□□ 0.57
HCFC1P51610 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
HCFC1P51610 AC142381.4-202ENST00000563973 229 ntBASIC18.6■□□□□ 0.57
HCFC1P51610 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC18.6■□□□□ 0.57
HCFC1P51610 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
HCFC1P51610 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
HCFC1P51610 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
HCFC1P51610 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
HCFC1P51610 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC18.59■□□□□ 0.57
HCFC1P51610 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
HCFC1P51610 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC18.59■□□□□ 0.57
HCFC1P51610 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
HCFC1P51610 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC18.59■□□□□ 0.57
HCFC1P51610 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC18.59■□□□□ 0.57
HCFC1P51610 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 15.6 ms