Protein–RNA interactions for Protein: P51148

RAB5C, Ras-related protein Rab-5C, humanhuman

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5CP51148 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
RAB5CP51148 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
RAB5CP51148 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RAB5CP51148 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RAB5CP51148 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RAB5CP51148 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
RAB5CP51148 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
RAB5CP51148 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
RAB5CP51148 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
RAB5CP51148 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
RAB5CP51148 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
RAB5CP51148 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC17.08■□□□□ 0.33
RAB5CP51148 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC17.08■□□□□ 0.33
RAB5CP51148 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC17.08■□□□□ 0.33
RAB5CP51148 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
RAB5CP51148 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC17.08■□□□□ 0.33
RAB5CP51148 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC17.08■□□□□ 0.33
RAB5CP51148 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
RAB5CP51148 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
RAB5CP51148 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
RAB5CP51148 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
RAB5CP51148 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
RAB5CP51148 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC17.08■□□□□ 0.32
RAB5CP51148 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
RAB5CP51148 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC17.08■□□□□ 0.32
RAB5CP51148 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
RAB5CP51148 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
RAB5CP51148 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC17.07■□□□□ 0.32
RAB5CP51148 LINC01529-204ENST00000636474 1715 ntBASIC17.07■□□□□ 0.32
RAB5CP51148 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC17.07■□□□□ 0.32
RAB5CP51148 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
RAB5CP51148 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RAB5CP51148 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC17.07■□□□□ 0.32
RAB5CP51148 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
RAB5CP51148 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
RAB5CP51148 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
RAB5CP51148 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
RAB5CP51148 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC17.07■□□□□ 0.32
RAB5CP51148 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RAB5CP51148 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC17.07■□□□□ 0.32
RAB5CP51148 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RAB5CP51148 AP005212.1-201ENST00000581547 1997 ntBASIC17.07■□□□□ 0.32
RAB5CP51148 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
RAB5CP51148 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC17.07■□□□□ 0.32
RAB5CP51148 MFF-203ENST00000349901 1716 ntTSL 2 BASIC17.07■□□□□ 0.32
RAB5CP51148 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
RAB5CP51148 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
RAB5CP51148 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
RAB5CP51148 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
RAB5CP51148 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
RAB5CP51148 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
RAB5CP51148 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RAB5CP51148 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
RAB5CP51148 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC17.06■□□□□ 0.32
RAB5CP51148 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
RAB5CP51148 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RAB5CP51148 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC17.06■□□□□ 0.32
RAB5CP51148 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
RAB5CP51148 HES4-204ENST00000484667 667 ntTSL 3 BASIC17.06■□□□□ 0.32
RAB5CP51148 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC17.06■□□□□ 0.32
RAB5CP51148 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RAB5CP51148 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
RAB5CP51148 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RAB5CP51148 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
RAB5CP51148 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RAB5CP51148 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RAB5CP51148 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RAB5CP51148 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC17.06■□□□□ 0.32
RAB5CP51148 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC17.06■□□□□ 0.32
RAB5CP51148 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
RAB5CP51148 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RAB5CP51148 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
RAB5CP51148 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
RAB5CP51148 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC17.05■□□□□ 0.32
RAB5CP51148 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RAB5CP51148 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
RAB5CP51148 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC17.05■□□□□ 0.32
RAB5CP51148 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RAB5CP51148 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RAB5CP51148 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RAB5CP51148 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RAB5CP51148 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC17.05■□□□□ 0.32
RAB5CP51148 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RAB5CP51148 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
RAB5CP51148 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC17.05■□□□□ 0.32
RAB5CP51148 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC17.05■□□□□ 0.32
RAB5CP51148 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
RAB5CP51148 AC009086.3-201ENST00000623486 1008 ntBASIC17.05■□□□□ 0.32
RAB5CP51148 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC17.05■□□□□ 0.32
RAB5CP51148 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RAB5CP51148 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RAB5CP51148 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC17.05■□□□□ 0.32
RAB5CP51148 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
RAB5CP51148 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC17.05■□□□□ 0.32
RAB5CP51148 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
RAB5CP51148 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
RAB5CP51148 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RAB5CP51148 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC17.04■□□□□ 0.32
RAB5CP51148 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RAB5CP51148 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms