Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
RNF144AP50876 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC19.73■□□□□ 0.75
RNF144AP50876 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RNF144AP50876 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RNF144AP50876 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
RNF144AP50876 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
RNF144AP50876 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RNF144AP50876 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RNF144AP50876 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RNF144AP50876 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RNF144AP50876 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
RNF144AP50876 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
RNF144AP50876 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC19.72■□□□□ 0.75
RNF144AP50876 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC19.72■□□□□ 0.75
RNF144AP50876 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
RNF144AP50876 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RNF144AP50876 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
RNF144AP50876 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC19.72■□□□□ 0.75
RNF144AP50876 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC19.72■□□□□ 0.75
RNF144AP50876 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC19.72■□□□□ 0.75
RNF144AP50876 MPST-208ENST00000628507 698 ntTSL 5 BASIC19.72■□□□□ 0.75
RNF144AP50876 AC105233.4-201ENST00000642045 216 ntBASIC19.72■□□□□ 0.75
RNF144AP50876 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
RNF144AP50876 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC19.72■□□□□ 0.75
RNF144AP50876 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
RNF144AP50876 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RNF144AP50876 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RNF144AP50876 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC19.72■□□□□ 0.75
RNF144AP50876 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC19.72■□□□□ 0.75
RNF144AP50876 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
RNF144AP50876 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
RNF144AP50876 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RNF144AP50876 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RNF144AP50876 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC19.71■□□□□ 0.75
RNF144AP50876 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
RNF144AP50876 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RNF144AP50876 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC19.71■□□□□ 0.75
RNF144AP50876 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
RNF144AP50876 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC19.71■□□□□ 0.75
RNF144AP50876 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
RNF144AP50876 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC19.71■□□□□ 0.75
RNF144AP50876 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC19.71■□□□□ 0.75
RNF144AP50876 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC19.71■□□□□ 0.75
RNF144AP50876 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC19.71■□□□□ 0.75
RNF144AP50876 AICDA-202ENST00000537228 667 ntTSL 5 BASIC19.71■□□□□ 0.75
RNF144AP50876 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RNF144AP50876 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
RNF144AP50876 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC19.71■□□□□ 0.75
RNF144AP50876 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC19.71■□□□□ 0.75
RNF144AP50876 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RNF144AP50876 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
RNF144AP50876 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
RNF144AP50876 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC19.7■□□□□ 0.74
RNF144AP50876 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
RNF144AP50876 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
RNF144AP50876 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RNF144AP50876 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RNF144AP50876 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
RNF144AP50876 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
RNF144AP50876 AC105265.2-201ENST00000467189 838 ntBASIC19.7■□□□□ 0.74
RNF144AP50876 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC19.7■□□□□ 0.74
RNF144AP50876 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC19.7■□□□□ 0.74
RNF144AP50876 MIR6084-201ENST00000622012 110 ntBASIC19.7■□□□□ 0.74
RNF144AP50876 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
RNF144AP50876 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RNF144AP50876 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
RNF144AP50876 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC19.7■□□□□ 0.74
RNF144AP50876 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RNF144AP50876 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RNF144AP50876 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
RNF144AP50876 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RNF144AP50876 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC19.7■□□□□ 0.74
RNF144AP50876 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RNF144AP50876 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC19.7■□□□□ 0.74
RNF144AP50876 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
RNF144AP50876 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
RNF144AP50876 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC19.69■□□□□ 0.74
RNF144AP50876 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC19.69■□□□□ 0.74
RNF144AP50876 AC026310.3-201ENST00000625186 2373 ntBASIC19.69■□□□□ 0.74
RNF144AP50876 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RNF144AP50876 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RNF144AP50876 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RNF144AP50876 EBPL-204ENST00000378272 766 ntTSL 3 BASIC19.69■□□□□ 0.74
RNF144AP50876 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RNF144AP50876 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RNF144AP50876 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RNF144AP50876 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RNF144AP50876 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RNF144AP50876 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RNF144AP50876 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC19.68■□□□□ 0.74
RNF144AP50876 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
RNF144AP50876 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC19.68■□□□□ 0.74
RNF144AP50876 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
RNF144AP50876 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RNF144AP50876 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RNF144AP50876 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC19.68■□□□□ 0.74
RNF144AP50876 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC19.68■□□□□ 0.74
RNF144AP50876 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC19.68■□□□□ 0.74
RNF144AP50876 AF106564.1-201ENST00000607058 2553 ntBASIC19.68■□□□□ 0.74
RNF144AP50876 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms