Protein–RNA interactions for Protein: P43004

SLC1A2, Excitatory amino acid transporter 2, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A2P43004 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
SLC1A2P43004 PXK-203ENST00000383715 1756 ntTSL 5 BASIC21.21■□□□□ 0.99
SLC1A2P43004 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SLC1A2P43004 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC21.21■□□□□ 0.99
SLC1A2P43004 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC21.21■□□□□ 0.99
SLC1A2P43004 AF213884.3-201ENST00000563833 479 ntBASIC21.21■□□□□ 0.99
SLC1A2P43004 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC21.21■□□□□ 0.99
SLC1A2P43004 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC21.21■□□□□ 0.99
SLC1A2P43004 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
SLC1A2P43004 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SLC1A2P43004 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SLC1A2P43004 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
SLC1A2P43004 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC21.21■□□□□ 0.99
SLC1A2P43004 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
SLC1A2P43004 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SLC1A2P43004 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.99
SLC1A2P43004 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
SLC1A2P43004 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SLC1A2P43004 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC21.2■□□□□ 0.98
SLC1A2P43004 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
SLC1A2P43004 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
SLC1A2P43004 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
SLC1A2P43004 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SLC1A2P43004 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC21.2■□□□□ 0.98
SLC1A2P43004 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
SLC1A2P43004 NALT1-201ENST00000429224 738 ntTSL 5 BASIC21.2■□□□□ 0.98
SLC1A2P43004 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC21.2■□□□□ 0.98
SLC1A2P43004 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC21.2■□□□□ 0.98
SLC1A2P43004 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
SLC1A2P43004 AL355001.2-201ENST00000620617 1191 ntBASIC21.2■□□□□ 0.98
SLC1A2P43004 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SLC1A2P43004 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
SLC1A2P43004 AL024507.2-201ENST00000606070 2574 ntBASIC21.2■□□□□ 0.98
SLC1A2P43004 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SLC1A2P43004 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
SLC1A2P43004 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
SLC1A2P43004 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC21.19■□□□□ 0.98
SLC1A2P43004 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
SLC1A2P43004 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SLC1A2P43004 DYM-203ENST00000442713 2147 ntTSL 2 BASIC21.19■□□□□ 0.98
SLC1A2P43004 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
SLC1A2P43004 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SLC1A2P43004 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SLC1A2P43004 MIR939-201ENST00000401314 82 ntBASIC21.19■□□□□ 0.98
SLC1A2P43004 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
SLC1A2P43004 AL031432.3-201ENST00000607698 485 ntBASIC21.19■□□□□ 0.98
SLC1A2P43004 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SLC1A2P43004 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SLC1A2P43004 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SLC1A2P43004 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
SLC1A2P43004 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SLC1A2P43004 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SLC1A2P43004 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SLC1A2P43004 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SLC1A2P43004 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SLC1A2P43004 LHPP-203ENST00000392757 840 ntTSL 3 BASIC21.18■□□□□ 0.98
SLC1A2P43004 AC105233.4-201ENST00000642045 216 ntBASIC21.18■□□□□ 0.98
SLC1A2P43004 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC21.18■□□□□ 0.98
SLC1A2P43004 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC21.18■□□□□ 0.98
SLC1A2P43004 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
SLC1A2P43004 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
SLC1A2P43004 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SLC1A2P43004 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC21.17■□□□□ 0.98
SLC1A2P43004 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC21.17■□□□□ 0.98
SLC1A2P43004 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC21.17■□□□□ 0.98
SLC1A2P43004 RASA4CP-201ENST00000424092 1398 ntBASIC21.17■□□□□ 0.98
SLC1A2P43004 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC21.17■□□□□ 0.98
SLC1A2P43004 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
SLC1A2P43004 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC21.17■□□□□ 0.98
SLC1A2P43004 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
SLC1A2P43004 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SLC1A2P43004 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC21.17■□□□□ 0.98
SLC1A2P43004 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
SLC1A2P43004 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SLC1A2P43004 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SLC1A2P43004 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
SLC1A2P43004 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SLC1A2P43004 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
SLC1A2P43004 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
SLC1A2P43004 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
SLC1A2P43004 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC21.16■□□□□ 0.98
SLC1A2P43004 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC21.16■□□□□ 0.98
SLC1A2P43004 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC21.16■□□□□ 0.98
SLC1A2P43004 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
SLC1A2P43004 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
SLC1A2P43004 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
SLC1A2P43004 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SLC1A2P43004 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SLC1A2P43004 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
SLC1A2P43004 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
SLC1A2P43004 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SLC1A2P43004 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
SLC1A2P43004 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC21.15■□□□□ 0.98
SLC1A2P43004 AC091305.1-201ENST00000479476 895 ntBASIC21.15■□□□□ 0.98
SLC1A2P43004 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
SLC1A2P43004 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
SLC1A2P43004 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC21.15■□□□□ 0.98
SLC1A2P43004 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SLC1A2P43004 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SLC1A2P43004 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC21.15■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 48.9 ms