Protein–RNA interactions for Protein: P37840

SNCA, Alpha-synuclein, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAP37840 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SNCAP37840 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SNCAP37840 AC009102.2-201ENST00000606772 1639 ntBASIC17.41■□□□□ 0.38
SNCAP37840 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SNCAP37840 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC17.41■□□□□ 0.38
SNCAP37840 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC17.41■□□□□ 0.38
SNCAP37840 MIR4787-201ENST00000607364 84 ntBASIC17.41■□□□□ 0.38
SNCAP37840 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
SNCAP37840 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SNCAP37840 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
SNCAP37840 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC17.41■□□□□ 0.38
SNCAP37840 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC17.41■□□□□ 0.38
SNCAP37840 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SNCAP37840 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
SNCAP37840 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SNCAP37840 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SNCAP37840 AF106564.1-201ENST00000607058 2553 ntBASIC17.4■□□□□ 0.38
SNCAP37840 AC004687.1-201ENST00000579003 1625 ntBASIC17.4■□□□□ 0.38
SNCAP37840 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC17.4■□□□□ 0.38
SNCAP37840 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SNCAP37840 LINC01006-201ENST00000333319 2292 ntBASIC17.4■□□□□ 0.38
SNCAP37840 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SNCAP37840 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SNCAP37840 CD72-202ENST00000378430 585 ntTSL 3 BASIC17.4■□□□□ 0.38
SNCAP37840 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC17.4■□□□□ 0.38
SNCAP37840 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC17.4■□□□□ 0.38
SNCAP37840 EXOG-217ENST00000630638 197 ntTSL 5 BASIC17.4■□□□□ 0.38
SNCAP37840 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SNCAP37840 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SNCAP37840 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC17.4■□□□□ 0.38
SNCAP37840 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
SNCAP37840 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SNCAP37840 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SNCAP37840 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
SNCAP37840 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
SNCAP37840 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
SNCAP37840 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC17.39■□□□□ 0.37
SNCAP37840 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SNCAP37840 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
SNCAP37840 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SNCAP37840 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC17.39■□□□□ 0.37
SNCAP37840 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC17.39■□□□□ 0.37
SNCAP37840 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
SNCAP37840 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC17.39■□□□□ 0.37
SNCAP37840 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SNCAP37840 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC17.39■□□□□ 0.37
SNCAP37840 TFPT-201ENST00000391757 774 ntTSL 5 BASIC17.39■□□□□ 0.37
SNCAP37840 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
SNCAP37840 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC17.39■□□□□ 0.37
SNCAP37840 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
SNCAP37840 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SNCAP37840 AC010997.5-201ENST00000609182 354 ntBASIC17.39■□□□□ 0.37
SNCAP37840 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC17.39■□□□□ 0.37
SNCAP37840 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SNCAP37840 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SNCAP37840 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SNCAP37840 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC17.39■□□□□ 0.37
SNCAP37840 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SNCAP37840 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC17.38■□□□□ 0.37
SNCAP37840 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
SNCAP37840 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC17.38■□□□□ 0.37
SNCAP37840 ADM-207ENST00000530439 1839 ntTSL 2 BASIC17.38■□□□□ 0.37
SNCAP37840 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC17.38■□□□□ 0.37
SNCAP37840 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
SNCAP37840 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
SNCAP37840 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC17.38■□□□□ 0.37
SNCAP37840 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC17.38■□□□□ 0.37
SNCAP37840 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC17.38■□□□□ 0.37
SNCAP37840 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
SNCAP37840 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
SNCAP37840 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC17.38■□□□□ 0.37
SNCAP37840 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SNCAP37840 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
SNCAP37840 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC17.37■□□□□ 0.37
SNCAP37840 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC17.37■□□□□ 0.37
SNCAP37840 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SNCAP37840 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SNCAP37840 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SNCAP37840 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
SNCAP37840 AC239859.2-201ENST00000444165 318 ntBASIC17.37■□□□□ 0.37
SNCAP37840 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC17.37■□□□□ 0.37
SNCAP37840 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SNCAP37840 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SNCAP37840 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC17.37■□□□□ 0.37
SNCAP37840 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC17.37■□□□□ 0.37
SNCAP37840 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SNCAP37840 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SNCAP37840 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
SNCAP37840 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC17.37■□□□□ 0.37
SNCAP37840 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SNCAP37840 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
SNCAP37840 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SNCAP37840 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
SNCAP37840 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC17.36■□□□□ 0.37
SNCAP37840 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
SNCAP37840 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
SNCAP37840 HES6-204ENST00000409182 863 ntTSL 2 BASIC17.36■□□□□ 0.37
SNCAP37840 TSPY9P-201ENST00000440215 945 ntBASIC17.36■□□□□ 0.37
SNCAP37840 TSPY11P-201ENST00000442607 1045 ntBASIC17.36■□□□□ 0.37
SNCAP37840 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 14.3 ms