Protein–RNA interactions for Protein: P33552

CKS2, Cyclin-dependent kinases regulatory subunit 2, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2P33552 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC15.61■□□□□ 0.09
CKS2P33552 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CKS2P33552 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC15.61■□□□□ 0.09
CKS2P33552 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CKS2P33552 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC15.61■□□□□ 0.09
CKS2P33552 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CKS2P33552 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
CKS2P33552 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CKS2P33552 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC15.6■□□□□ 0.09
CKS2P33552 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CKS2P33552 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC15.6■□□□□ 0.09
CKS2P33552 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC15.6■□□□□ 0.09
CKS2P33552 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CKS2P33552 RARG-204ENST00000543726 1779 ntTSL 2 BASIC15.6■□□□□ 0.09
CKS2P33552 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CKS2P33552 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CKS2P33552 RPS2-202ENST00000526522 924 ntTSL 2 BASIC15.6■□□□□ 0.09
CKS2P33552 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC15.6■□□□□ 0.09
CKS2P33552 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
CKS2P33552 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
CKS2P33552 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
CKS2P33552 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CKS2P33552 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
CKS2P33552 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
CKS2P33552 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC15.6■□□□□ 0.09
CKS2P33552 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
CKS2P33552 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
CKS2P33552 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CKS2P33552 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC15.59■□□□□ 0.09
CKS2P33552 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CKS2P33552 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
CKS2P33552 OXCT2P1-201ENST00000447263 1535 ntBASIC15.59■□□□□ 0.09
CKS2P33552 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
CKS2P33552 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CKS2P33552 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC15.59■□□□□ 0.09
CKS2P33552 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
CKS2P33552 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CKS2P33552 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC15.59■□□□□ 0.09
CKS2P33552 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CKS2P33552 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC15.59■□□□□ 0.09
CKS2P33552 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
CKS2P33552 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
CKS2P33552 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
CKS2P33552 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CKS2P33552 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CKS2P33552 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
CKS2P33552 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CKS2P33552 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC15.59■□□□□ 0.09
CKS2P33552 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
CKS2P33552 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC15.59■□□□□ 0.09
CKS2P33552 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
CKS2P33552 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CKS2P33552 ADM-207ENST00000530439 1839 ntTSL 2 BASIC15.59■□□□□ 0.09
CKS2P33552 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CKS2P33552 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
CKS2P33552 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.09
CKS2P33552 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.09
CKS2P33552 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
CKS2P33552 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC15.58■□□□□ 0.09
CKS2P33552 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.09
CKS2P33552 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
CKS2P33552 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
CKS2P33552 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
CKS2P33552 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC15.58■□□□□ 0.08
CKS2P33552 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CKS2P33552 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
CKS2P33552 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC15.58■□□□□ 0.08
CKS2P33552 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CKS2P33552 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC15.58■□□□□ 0.08
CKS2P33552 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CKS2P33552 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC15.58■□□□□ 0.08
CKS2P33552 MIR4281-201ENST00000580852 62 ntBASIC15.58■□□□□ 0.08
CKS2P33552 AC019171.1-201ENST00000601251 1056 ntBASIC15.58■□□□□ 0.08
CKS2P33552 MIR7108-201ENST00000614319 87 ntBASIC15.58■□□□□ 0.08
CKS2P33552 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC15.58■□□□□ 0.08
CKS2P33552 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC15.58■□□□□ 0.08
CKS2P33552 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
CKS2P33552 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC15.58■□□□□ 0.08
CKS2P33552 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CKS2P33552 AC004687.1-201ENST00000579003 1625 ntBASIC15.57■□□□□ 0.08
CKS2P33552 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CKS2P33552 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CKS2P33552 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
CKS2P33552 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CKS2P33552 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CKS2P33552 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC15.57■□□□□ 0.08
CKS2P33552 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC15.57■□□□□ 0.08
CKS2P33552 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CKS2P33552 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CKS2P33552 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CKS2P33552 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC15.57■□□□□ 0.08
CKS2P33552 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CKS2P33552 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CKS2P33552 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CKS2P33552 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC15.57■□□□□ 0.08
CKS2P33552 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CKS2P33552 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
CKS2P33552 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC15.57■□□□□ 0.08
CKS2P33552 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
CKS2P33552 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 17.3 ms