Protein–RNA interactions for Protein: P32588

PUB1, Nuclear and cytoplasmic polyadenylated RNA-binding protein PUB1, yeastyeast

Known RBP RIP-Chip data

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
PUB1P32588 YIL054WYIL054W 318 nt4.65□□□□□ -1.67
PUB1P32588 GAT4YIR013C 366 nt4.65□□□□□ -1.67
PUB1P32588 PFD1YJL179W 330 nt4.65□□□□□ -1.67
PUB1P32588 YMR290W-AYMR290W-A 348 nt4.65□□□□□ -1.67
PUB1P32588 DAL82YNL314W 768 nt4.65□□□□□ -1.67
PUB1P32588 YOL134CYOL134C 390 nt4.65□□□□□ -1.67
PUB1P32588 INA17YPL099C 549 nt4.65□□□□□ -1.67
PUB1P32588 SRB6YBR253W 366 nt4.65□□□□□ -1.67
PUB1P32588 APE1YKL103C 1545 nt4.65□□□□□ -1.67
PUB1P32588 OCA5YHL029C 2040 nt4.65□□□□□ -1.67 RIP-Chip
PUB1P32588 PRR1YKL116C 1557 nt4.65□□□□□ -1.67 RIP-Chip
PUB1P32588 STE24YJR117W 1362 nt4.65□□□□□ -1.67 RIP-Chip
PUB1P32588 THP1YOL072W 1368 nt4.65□□□□□ -1.67
PUB1P32588 NUD1YOR373W 2556 nt4.64□□□□□ -1.67
PUB1P32588 RTK1YDL025C 1863 nt4.64□□□□□ -1.67
PUB1P32588 snR85snR85 171 nt4.64□□□□□ -1.67
PUB1P32588 MLC1YGL106W 450 nt4.64□□□□□ -1.67
PUB1P32588 DAD2YKR083C 402 nt4.64□□□□□ -1.67
PUB1P32588 RFU1YLR073C 603 nt4.64□□□□□ -1.67 RIP-Chip
PUB1P32588 AAR2YBL074C 1068 nt4.64□□□□□ -1.67
PUB1P32588 YOR170WYOR170W 306 nt4.64□□□□□ -1.67
PUB1P32588 IRC16YPR038W 360 nt4.64□□□□□ -1.67
PUB1P32588 PMT5YDL093W 2232 nt4.64□□□□□ -1.67
PUB1P32588 HCM1YCR065W 1695 nt4.64□□□□□ -1.67
PUB1P32588 MOT2YER068W 1764 nt4.63□□□□□ -1.67 RIP-Chip
PUB1P32588 STE7YDL159W 1548 nt4.63□□□□□ -1.67
PUB1P32588 MET3YJR010W 1536 nt4.63□□□□□ -1.67
PUB1P32588 MRPL11YDL202W 750 nt4.63□□□□□ -1.67
PUB1P32588 SCS2YER120W 735 nt4.63□□□□□ -1.67 RIP-Chip
PUB1P32588 YFL064CYFL064C 525 nt4.63□□□□□ -1.67
PUB1P32588 NAG1YGR031C-A 492 nt4.63□□□□□ -1.67
PUB1P32588 PGU1YJR153W 1086 nt4.63□□□□□ -1.67
PUB1P32588 LDB18YLL049W 540 nt4.63□□□□□ -1.67 RIP-Chip
PUB1P32588 RPS19AYOL121C 435 nt4.63□□□□□ -1.67
PUB1P32588 MRM1YOR201C 1239 nt4.63□□□□□ -1.67
PUB1P32588 YOR277CYOR277C 309 nt4.63□□□□□ -1.67
PUB1P32588 CAM1YPL048W 1248 nt4.63□□□□□ -1.67
PUB1P32588 YBR076C-AYBR076C-A 267 nt4.63□□□□□ -1.67
PUB1P32588 FYV5YCL058C 459 nt4.63□□□□□ -1.67
PUB1P32588 CDC14YFR028C 1656 nt4.63□□□□□ -1.67
PUB1P32588 HAP4YKL109W 1665 nt4.63□□□□□ -1.67 RIP-Chip
PUB1P32588 AVT3YKL146W 2079 nt4.63□□□□□ -1.67
PUB1P32588 GAL10YBR019C 2100 nt4.63□□□□□ -1.67
PUB1P32588 DNF2YDR093W 4839 nt4.62□□□□□ -1.67
PUB1P32588 UBP7YIL156W 3216 nt4.62□□□□□ -1.67
PUB1P32588 YCR013CYCR013C 648 nt4.62□□□□□ -1.67
PUB1P32588 YER137W-AYER137W-A 306 nt4.62□□□□□ -1.67
PUB1P32588 YER187WYER187W 426 nt4.62□□□□□ -1.67
PUB1P32588 RPL28YGL103W 450 nt4.62□□□□□ -1.67
PUB1P32588 YIL171W-AYIL171W-A 453 nt4.62□□□□□ -1.67
PUB1P32588 YJL028WYJL028W 336 nt4.62□□□□□ -1.67
PUB1P32588 YJL220WYJL220W 453 nt4.62□□□□□ -1.67
PUB1P32588 TPK3YKL166C 1197 nt4.62□□□□□ -1.67
PUB1P32588 EOS1YNL080C 1101 nt4.62□□□□□ -1.67 RIP-Chip
PUB1P32588 YPT53YNL093W 663 nt4.62□□□□□ -1.67
PUB1P32588 POP3YNL282W 588 nt4.62□□□□□ -1.67
PUB1P32588 RDL2YOR286W 450 nt4.62□□□□□ -1.67 RIP-Chip
PUB1P32588 HPA2YPR193C 471 nt4.62□□□□□ -1.67
PUB1P32588 AVO1YOL078W 3531 nt4.62□□□□□ -1.67
PUB1P32588 IOC4YMR044W 1428 nt4.62□□□□□ -1.67
PUB1P32588 HOF1YMR032W 2010 nt4.62□□□□□ -1.67
PUB1P32588 MCP2YLR253W 1710 nt4.61□□□□□ -1.67
PUB1P32588 MMP1YLL061W 1752 nt4.61□□□□□ -1.67 RIP-Chip
PUB1P32588 YDL007C-AYDL007C-A 258 nt4.61□□□□□ -1.67
PUB1P32588 MIC26YGR235C 702 nt4.61□□□□□ -1.67
PUB1P32588 RPB3YIL021W 957 nt4.61□□□□□ -1.67
PUB1P32588 YML031C-AYML031C-A 336 nt4.61□□□□□ -1.67
PUB1P32588 PPG1YNR032W 1107 nt4.61□□□□□ -1.67
PUB1P32588 PDX3YBR035C 687 nt4.61□□□□□ -1.67
PUB1P32588 YPR174CYPR174C 666 nt4.61□□□□□ -1.67
PUB1P32588 PMS1YNL082W 2622 nt4.61□□□□□ -1.67
PUB1P32588 KIN3YAR018C 1308 nt4.61□□□□□ -1.67
PUB1P32588 AYT1YLL063C 1425 nt4.61□□□□□ -1.67
PUB1P32588 RSC6YCR052W 1452 nt4.61□□□□□ -1.67
PUB1P32588 PAL1YDR348C 1500 nt4.61□□□□□ -1.67
PUB1P32588 BRE2YLR015W 1518 nt4.61□□□□□ -1.67
PUB1P32588 SRP1YNL189W 1629 nt4.61□□□□□ -1.67
PUB1P32588 POL4YCR014C 1749 nt4.6□□□□□ -1.67
PUB1P32588 DSS1YMR287C 2910 nt4.6□□□□□ -1.67
PUB1P32588 API2YDR525W 330 nt4.6□□□□□ -1.67
PUB1P32588 RPS25AYGR027C 327 nt4.6□□□□□ -1.67 RIP-Chip
PUB1P32588 RPL8AYHL033C 771 nt4.6□□□□□ -1.67
PUB1P32588 YKL044WYKL044W 321 nt4.6□□□□□ -1.67 RIP-Chip
PUB1P32588 SCW10YMR305C 1170 nt4.6□□□□□ -1.67 RIP-Chip
PUB1P32588 RPL18BYNL301C 561 nt4.6□□□□□ -1.67 RIP-Chip
PUB1P32588 ZUO1YGR285C 1302 nt4.6□□□□□ -1.67
PUB1P32588 PRP3YDR473C 1410 nt4.6□□□□□ -1.67
PUB1P32588 DBP3YGL078C 1572 nt4.6□□□□□ -1.67
PUB1P32588 SET5YHR207C 1581 nt4.6□□□□□ -1.67
PUB1P32588 RKM3YBR030W 1659 nt4.6□□□□□ -1.67
PUB1P32588 PHO8YDR481C 1701 nt4.6□□□□□ -1.67 RIP-Chip
PUB1P32588 CCZ1YBR131W 2115 nt4.6□□□□□ -1.67
PUB1P32588 EIS1YMR031C 2532 nt4.6□□□□□ -1.67
PUB1P32588 YCR090CYCR090C 549 nt4.59□□□□□ -1.67
PUB1P32588 PAM1YDR251W 2493 nt4.59□□□□□ -1.67 RIP-Chip
PUB1P32588 YDR406W-AYDR406W-A 246 nt4.59□□□□□ -1.67
PUB1P32588 YER084WYER084W 387 nt4.59□□□□□ -1.67
PUB1P32588 TDH3YGR192C 999 nt4.59□□□□□ -1.67
PUB1P32588 YMR046W-AYMR046W-A 129 nt4.59□□□□□ -1.67 RIP-Chip
PUB1P32588 YPL276WYPL276W 438 nt4.59□□□□□ -1.67
Retrieved 100 of 7,029 protein–RNA pairs in 17.8 ms