Protein–RNA interactions for Protein: P29320

EPHA3, Ephrin type-A receptor 3, humanhuman

Predictions only

Length 983 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3P29320 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC20.67■□□□□ 0.9
EPHA3P29320 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
EPHA3P29320 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
EPHA3P29320 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
EPHA3P29320 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
EPHA3P29320 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
EPHA3P29320 RBM38-205ENST00000440234 686 ntTSL 2 BASIC20.66■□□□□ 0.9
EPHA3P29320 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
EPHA3P29320 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
EPHA3P29320 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC20.66■□□□□ 0.9
EPHA3P29320 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC20.65■□□□□ 0.9
EPHA3P29320 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
EPHA3P29320 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
EPHA3P29320 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC20.65■□□□□ 0.9
EPHA3P29320 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
EPHA3P29320 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
EPHA3P29320 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC20.65■□□□□ 0.9
EPHA3P29320 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC20.65■□□□□ 0.9
EPHA3P29320 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
EPHA3P29320 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC20.65■□□□□ 0.9
EPHA3P29320 UNC93B8-201ENST00000511903 705 ntBASIC20.65■□□□□ 0.9
EPHA3P29320 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC20.65■□□□□ 0.9
EPHA3P29320 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
EPHA3P29320 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
EPHA3P29320 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
EPHA3P29320 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.9
EPHA3P29320 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
EPHA3P29320 OXCT2P1-201ENST00000447263 1535 ntBASIC20.64■□□□□ 0.9
EPHA3P29320 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
EPHA3P29320 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
EPHA3P29320 AC009299.2-201ENST00000482477 511 ntBASIC20.64■□□□□ 0.89
EPHA3P29320 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC20.64■□□□□ 0.89
EPHA3P29320 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC20.64■□□□□ 0.89
EPHA3P29320 AC099791.2-201ENST00000605725 427 ntBASIC20.64■□□□□ 0.89
EPHA3P29320 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC20.64■□□□□ 0.89
EPHA3P29320 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC20.64■□□□□ 0.89
EPHA3P29320 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC20.64■□□□□ 0.89
EPHA3P29320 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
EPHA3P29320 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
EPHA3P29320 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
EPHA3P29320 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
EPHA3P29320 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC20.64■□□□□ 0.89
EPHA3P29320 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC20.63■□□□□ 0.89
EPHA3P29320 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC20.63■□□□□ 0.89
EPHA3P29320 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
EPHA3P29320 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
EPHA3P29320 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
EPHA3P29320 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
EPHA3P29320 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
EPHA3P29320 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
EPHA3P29320 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC20.63■□□□□ 0.89
EPHA3P29320 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC20.63■□□□□ 0.89
EPHA3P29320 RARRES2P1-201ENST00000474487 481 ntBASIC20.63■□□□□ 0.89
EPHA3P29320 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC20.63■□□□□ 0.89
EPHA3P29320 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC20.63■□□□□ 0.89
EPHA3P29320 AC068587.7-201ENST00000641602 218 ntBASIC20.63■□□□□ 0.89
EPHA3P29320 AL049796.1-201ENST00000565336 1766 ntBASIC20.63■□□□□ 0.89
EPHA3P29320 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
EPHA3P29320 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC20.63■□□□□ 0.89
EPHA3P29320 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
EPHA3P29320 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
EPHA3P29320 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
EPHA3P29320 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
EPHA3P29320 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC20.63■□□□□ 0.89
EPHA3P29320 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC20.63■□□□□ 0.89
EPHA3P29320 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
EPHA3P29320 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
EPHA3P29320 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
EPHA3P29320 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC20.62■□□□□ 0.89
EPHA3P29320 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
EPHA3P29320 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
EPHA3P29320 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
EPHA3P29320 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
EPHA3P29320 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC20.62■□□□□ 0.89
EPHA3P29320 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
EPHA3P29320 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC20.62■□□□□ 0.89
EPHA3P29320 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC20.62■□□□□ 0.89
EPHA3P29320 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
EPHA3P29320 FEM1AP1-201ENST00000431297 1995 ntBASIC20.62■□□□□ 0.89
EPHA3P29320 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
EPHA3P29320 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
EPHA3P29320 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
EPHA3P29320 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
EPHA3P29320 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
EPHA3P29320 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
EPHA3P29320 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC20.61■□□□□ 0.89
EPHA3P29320 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
EPHA3P29320 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
EPHA3P29320 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
EPHA3P29320 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
EPHA3P29320 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC20.61■□□□□ 0.89
EPHA3P29320 AK3-203ENST00000447596 705 ntTSL 2 BASIC20.61■□□□□ 0.89
EPHA3P29320 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
EPHA3P29320 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
EPHA3P29320 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
EPHA3P29320 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
EPHA3P29320 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC20.61■□□□□ 0.89
EPHA3P29320 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
EPHA3P29320 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC20.61■□□□□ 0.89
EPHA3P29320 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms