Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 AL355075.4-201ENST00000554988 638 ntBASIC28.42■■■□□ 2.14
RXRBP28702 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
RXRBP28702 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
RXRBP28702 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC28.42■■■□□ 2.14
RXRBP28702 KRT17P1-201ENST00000399211 1546 ntBASIC28.42■■■□□ 2.14
RXRBP28702 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC28.42■■■□□ 2.14
RXRBP28702 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC28.42■■■□□ 2.14
RXRBP28702 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC28.41■■■□□ 2.14
RXRBP28702 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC28.41■■■□□ 2.14
RXRBP28702 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC28.41■■■□□ 2.14
RXRBP28702 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC28.41■■■□□ 2.14
RXRBP28702 AC053503.5-201ENST00000601508 636 ntBASIC28.41■■■□□ 2.14
RXRBP28702 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC28.41■■■□□ 2.14
RXRBP28702 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC28.4■■■□□ 2.14
RXRBP28702 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC28.4■■■□□ 2.14
RXRBP28702 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
RXRBP28702 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC28.4■■■□□ 2.14
RXRBP28702 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC28.4■■■□□ 2.14
RXRBP28702 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC28.4■■■□□ 2.14
RXRBP28702 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC28.4■■■□□ 2.14
RXRBP28702 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC28.4■■■□□ 2.14
RXRBP28702 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC28.4■■■□□ 2.14
RXRBP28702 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC28.4■■■□□ 2.14
RXRBP28702 AC092865.7-201ENST00000641832 219 ntBASIC28.4■■■□□ 2.14
RXRBP28702 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC28.4■■■□□ 2.14
RXRBP28702 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
RXRBP28702 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC28.4■■■□□ 2.14
RXRBP28702 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC28.39■■■□□ 2.14
RXRBP28702 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.14
RXRBP28702 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.14
RXRBP28702 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC28.39■■■□□ 2.14
RXRBP28702 AC120498.10-201ENST00000621827 505 ntBASIC28.39■■■□□ 2.14
RXRBP28702 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC28.39■■■□□ 2.13
RXRBP28702 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.13
RXRBP28702 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC28.38■■■□□ 2.13
RXRBP28702 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC28.38■■■□□ 2.13
RXRBP28702 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC28.38■■■□□ 2.13
RXRBP28702 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC28.38■■■□□ 2.13
RXRBP28702 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC28.38■■■□□ 2.13
RXRBP28702 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC28.38■■■□□ 2.13
RXRBP28702 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC28.38■■■□□ 2.13
RXRBP28702 PKM-203ENST00000389093 2279 ntTSL 5 BASIC28.38■■■□□ 2.13
RXRBP28702 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC28.37■■■□□ 2.13
RXRBP28702 AC092368.3-202ENST00000574180 1591 ntBASIC28.37■■■□□ 2.13
RXRBP28702 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
RXRBP28702 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC28.37■■■□□ 2.13
RXRBP28702 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC28.37■■■□□ 2.13
RXRBP28702 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
RXRBP28702 TK2-204ENST00000525974 1178 ntTSL 2 BASIC28.37■■■□□ 2.13
RXRBP28702 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC28.37■■■□□ 2.13
RXRBP28702 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC28.37■■■□□ 2.13
RXRBP28702 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC28.37■■■□□ 2.13
RXRBP28702 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC28.37■■■□□ 2.13
RXRBP28702 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC28.37■■■□□ 2.13
RXRBP28702 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
RXRBP28702 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC28.36■■■□□ 2.13
RXRBP28702 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC28.36■■■□□ 2.13
RXRBP28702 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC28.36■■■□□ 2.13
RXRBP28702 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC28.36■■■□□ 2.13
RXRBP28702 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC28.36■■■□□ 2.13
RXRBP28702 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC28.36■■■□□ 2.13
RXRBP28702 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC28.36■■■□□ 2.13
RXRBP28702 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
RXRBP28702 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
RXRBP28702 CRAT-202ENST00000393384 973 ntTSL 2 BASIC28.35■■■□□ 2.13
RXRBP28702 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC28.35■■■□□ 2.13
RXRBP28702 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC28.35■■■□□ 2.13
RXRBP28702 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC28.35■■■□□ 2.13
RXRBP28702 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC28.35■■■□□ 2.13
RXRBP28702 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
RXRBP28702 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC28.34■■■□□ 2.13
RXRBP28702 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
RXRBP28702 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC28.34■■■□□ 2.13
RXRBP28702 AL355472.2-201ENST00000422958 438 ntBASIC28.34■■■□□ 2.13
RXRBP28702 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC28.34■■■□□ 2.13
RXRBP28702 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
RXRBP28702 SOX15-203ENST00000570788 1093 ntBASIC28.34■■■□□ 2.13
RXRBP28702 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC28.34■■■□□ 2.13
RXRBP28702 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC28.34■■■□□ 2.13
RXRBP28702 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC28.34■■■□□ 2.13
RXRBP28702 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
RXRBP28702 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC28.33■■■□□ 2.13
RXRBP28702 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
RXRBP28702 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC28.33■■■□□ 2.13
RXRBP28702 HES2-205ENST00000487437 968 ntTSL 3 BASIC28.33■■■□□ 2.13
RXRBP28702 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
RXRBP28702 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC28.33■■■□□ 2.13
RXRBP28702 NME3-204ENST00000563498 920 ntTSL 2 BASIC28.33■■■□□ 2.13
RXRBP28702 AL353708.3-201ENST00000610272 989 ntBASIC28.33■■■□□ 2.13
RXRBP28702 AC113410.3-201ENST00000623366 203 ntBASIC28.33■■■□□ 2.13
RXRBP28702 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
RXRBP28702 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC28.33■■■□□ 2.13
RXRBP28702 RBM17P2-201ENST00000616397 1405 ntBASIC28.33■■■□□ 2.13
RXRBP28702 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC28.33■■■□□ 2.13
RXRBP28702 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
RXRBP28702 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
RXRBP28702 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC28.32■■■□□ 2.12
RXRBP28702 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC28.32■■■□□ 2.12
RXRBP28702 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC28.32■■■□□ 2.12
RXRBP28702 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC28.32■■■□□ 2.12
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms