Protein–RNA interactions for Protein: P26045

PTPN3, Tyrosine-protein phosphatase non-receptor type 3, humanhuman

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3P26045 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PTPN3P26045 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC21.72■■□□□ 1.07
PTPN3P26045 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC21.72■■□□□ 1.07
PTPN3P26045 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC21.72■■□□□ 1.07
PTPN3P26045 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PTPN3P26045 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PTPN3P26045 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
PTPN3P26045 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC21.72■■□□□ 1.07
PTPN3P26045 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
PTPN3P26045 AC055733.4-201ENST00000638462 1354 ntBASIC21.72■■□□□ 1.07
PTPN3P26045 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PTPN3P26045 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC21.71■■□□□ 1.07
PTPN3P26045 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PTPN3P26045 MTURN-203ENST00000409688 843 ntTSL 2 BASIC21.71■■□□□ 1.07
PTPN3P26045 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC21.71■■□□□ 1.07
PTPN3P26045 AC105265.2-201ENST00000467189 838 ntBASIC21.71■■□□□ 1.07
PTPN3P26045 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
PTPN3P26045 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC21.71■■□□□ 1.07
PTPN3P26045 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC21.71■■□□□ 1.07
PTPN3P26045 AC005224.4-201ENST00000583262 1652 ntBASIC21.71■■□□□ 1.07
PTPN3P26045 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
PTPN3P26045 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
PTPN3P26045 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC21.71■■□□□ 1.07
PTPN3P26045 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PTPN3P26045 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC21.7■■□□□ 1.06
PTPN3P26045 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
PTPN3P26045 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
PTPN3P26045 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
PTPN3P26045 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC21.7■■□□□ 1.06
PTPN3P26045 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC21.7■■□□□ 1.06
PTPN3P26045 MPST-204ENST00000404393 1329 ntTSL 5 BASIC21.7■■□□□ 1.06
PTPN3P26045 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC21.7■■□□□ 1.06
PTPN3P26045 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
PTPN3P26045 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC21.7■■□□□ 1.06
PTPN3P26045 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
PTPN3P26045 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
PTPN3P26045 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
PTPN3P26045 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
PTPN3P26045 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
PTPN3P26045 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
PTPN3P26045 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC21.69■■□□□ 1.06
PTPN3P26045 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
PTPN3P26045 AL137060.1-201ENST00000618151 2648 ntBASIC21.69■■□□□ 1.06
PTPN3P26045 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC21.69■■□□□ 1.06
PTPN3P26045 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
PTPN3P26045 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC21.69■■□□□ 1.06
PTPN3P26045 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC21.69■■□□□ 1.06
PTPN3P26045 AL354811.1-201ENST00000610286 706 ntBASIC21.69■■□□□ 1.06
PTPN3P26045 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC21.69■■□□□ 1.06
PTPN3P26045 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
PTPN3P26045 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
PTPN3P26045 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
PTPN3P26045 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC21.68■■□□□ 1.06
PTPN3P26045 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
PTPN3P26045 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
PTPN3P26045 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
PTPN3P26045 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
PTPN3P26045 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
PTPN3P26045 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
PTPN3P26045 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
PTPN3P26045 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
PTPN3P26045 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
PTPN3P26045 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
PTPN3P26045 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
PTPN3P26045 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC21.67■■□□□ 1.06
PTPN3P26045 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC21.67■■□□□ 1.06
PTPN3P26045 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
PTPN3P26045 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC21.67■■□□□ 1.06
PTPN3P26045 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC21.67■■□□□ 1.06
PTPN3P26045 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC21.67■■□□□ 1.06
PTPN3P26045 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
PTPN3P26045 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC21.66■■□□□ 1.06
PTPN3P26045 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC21.66■■□□□ 1.06
PTPN3P26045 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
PTPN3P26045 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC21.66■■□□□ 1.06
PTPN3P26045 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC21.66■■□□□ 1.06
PTPN3P26045 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
PTPN3P26045 IRS3P-201ENST00000223076 1006 ntBASIC21.66■■□□□ 1.06
PTPN3P26045 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
PTPN3P26045 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC21.66■■□□□ 1.06
PTPN3P26045 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC21.66■■□□□ 1.06
PTPN3P26045 MIR6084-201ENST00000622012 110 ntBASIC21.66■■□□□ 1.06
PTPN3P26045 AL358852.1-201ENST00000623174 1268 ntBASIC21.66■■□□□ 1.06
PTPN3P26045 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
PTPN3P26045 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
PTPN3P26045 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
PTPN3P26045 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
PTPN3P26045 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
PTPN3P26045 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC21.65■■□□□ 1.06
PTPN3P26045 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
PTPN3P26045 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
PTPN3P26045 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
PTPN3P26045 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC21.65■■□□□ 1.06
PTPN3P26045 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
PTPN3P26045 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC21.65■■□□□ 1.06
PTPN3P26045 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC21.65■■□□□ 1.06
PTPN3P26045 TPRG1LP1-201ENST00000598702 760 ntBASIC21.65■■□□□ 1.06
PTPN3P26045 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC21.65■■□□□ 1.06
PTPN3P26045 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC21.65■■□□□ 1.06
PTPN3P26045 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC21.65■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 46.9 ms