Protein–RNA interactions for Protein: P22516

CHL1, ATP-dependent DNA helicase CHL1, yeastyeast

Predicted RBP Predictions only

Length 861 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CHL1P22516 TFB5YDR079C-A 219 nt6.23□□□□□ -1.41
CHL1P22516 PPM1YDR435C 987 nt6.23□□□□□ -1.41
CHL1P22516 tG(GCC)BtG(GCC)B 71 nt6.23□□□□□ -1.41
CHL1P22516 SUF16tG(GCC)C 71 nt6.23□□□□□ -1.41
CHL1P22516 tG(GCC)D1tG(GCC)D1 71 nt6.23□□□□□ -1.41
CHL1P22516 tG(GCC)D2tG(GCC)D2 71 nt6.23□□□□□ -1.41
CHL1P22516 tG(GCC)EtG(GCC)E 71 nt6.23□□□□□ -1.41
CHL1P22516 SUF20tG(GCC)F1 71 nt6.23□□□□□ -1.41
CHL1P22516 tG(GCC)F2tG(GCC)F2 71 nt6.23□□□□□ -1.41
CHL1P22516 tG(GCC)G1tG(GCC)G1 71 nt6.23□□□□□ -1.41
CHL1P22516 tG(GCC)G2tG(GCC)G2 71 nt6.23□□□□□ -1.41
CHL1P22516 tG(GCC)J1tG(GCC)J1 71 nt6.23□□□□□ -1.41
CHL1P22516 SUF23tG(GCC)J2 71 nt6.23□□□□□ -1.41
CHL1P22516 tG(GCC)MtG(GCC)M 71 nt6.23□□□□□ -1.41
CHL1P22516 tG(GCC)O1tG(GCC)O1 71 nt6.23□□□□□ -1.41
CHL1P22516 SUF17tG(GCC)O2 71 nt6.23□□□□□ -1.41
CHL1P22516 tG(GCC)P1tG(GCC)P1 71 nt6.23□□□□□ -1.41
CHL1P22516 tG(GCC)P2tG(GCC)P2 71 nt6.23□□□□□ -1.41
CHL1P22516 PHO86YJL117W 936 nt6.23□□□□□ -1.41
CHL1P22516 MTC2YKL098W 1074 nt6.23□□□□□ -1.41
CHL1P22516 ERD2YBL040C 660 nt6.23□□□□□ -1.41
CHL1P22516 RPL18BYNL301C 561 nt6.23□□□□□ -1.41
CHL1P22516 INA17YPL099C 549 nt6.23□□□□□ -1.41
CHL1P22516 YPL250W-AYPL250W-A 288 nt6.23□□□□□ -1.41
CHL1P22516 snR49snR49 165 nt6.23□□□□□ -1.41
CHL1P22516 GAA1YLR088W 1845 nt6.22□□□□□ -1.41
CHL1P22516 EDE1YBL047C 4146 nt6.22□□□□□ -1.41
CHL1P22516 ULA1YPL003W 1389 nt6.22□□□□□ -1.41
CHL1P22516 YPS7YDR349C 1791 nt6.22□□□□□ -1.41
CHL1P22516 HSP12YFL014W 330 nt6.22□□□□□ -1.41
CHL1P22516 YGR153WYGR153W 654 nt6.22□□□□□ -1.41
CHL1P22516 MIC26YGR235C 702 nt6.22□□□□□ -1.41
CHL1P22516 YHR213W-AYHR213W-A 234 nt6.22□□□□□ -1.41
CHL1P22516 RPS19AYOL121C 435 nt6.22□□□□□ -1.41
CHL1P22516 YPR114WYPR114W 948 nt6.22□□□□□ -1.41
CHL1P22516 TRE2YOR256C 2430 nt6.22□□□□□ -1.41
CHL1P22516 MSA1YOR066W 1890 nt6.22□□□□□ -1.41
CHL1P22516 VPS73YGL104C 1461 nt6.22□□□□□ -1.41
CHL1P22516 KNS1YLL019C 2214 nt6.21□□□□□ -1.42
CHL1P22516 SDH4YDR178W 546 nt6.21□□□□□ -1.42
CHL1P22516 VOA1YGR106C 798 nt6.21□□□□□ -1.42
CHL1P22516 NBL1YHR199C-A 222 nt6.21□□□□□ -1.42
CHL1P22516 YIL071W-AYIL071W-A 477 nt6.21□□□□□ -1.42
CHL1P22516 HIS5YIL116W 1158 nt6.21□□□□□ -1.42
CHL1P22516 GCN3YKR026C 918 nt6.21□□□□□ -1.42
CHL1P22516 RPL5YPL131W 894 nt6.21□□□□□ -1.42
CHL1P22516 YBR090CYBR090C 369 nt6.21□□□□□ -1.42
CHL1P22516 ORC2YBR060C 1863 nt6.21□□□□□ -1.42
CHL1P22516 CYC8YBR112C 2901 nt6.21□□□□□ -1.42
CHL1P22516 YGR054WYGR054W 1929 nt6.21□□□□□ -1.42
CHL1P22516 YLL067CYLL067C 3618 nt6.2□□□□□ -1.42
CHL1P22516 SMF2YHR050W 1650 nt6.2□□□□□ -1.42
CHL1P22516 HRD1YOL013C 1656 nt6.2□□□□□ -1.42
CHL1P22516 SWC4YGR002C 1431 nt6.2□□□□□ -1.42
CHL1P22516 YDL218WYDL218W 954 nt6.2□□□□□ -1.42
CHL1P22516 WIP1YDR374W-A 270 nt6.2□□□□□ -1.42
CHL1P22516 SMD1YGR074W 441 nt6.2□□□□□ -1.42
CHL1P22516 YIL171WYIL171W 330 nt6.2□□□□□ -1.42
CHL1P22516 TOS6YNL300W 309 nt6.2□□□□□ -1.42
CHL1P22516 snR24snR24 89 nt6.2□□□□□ -1.42
CHL1P22516 MSY1YPL097W 1479 nt6.2□□□□□ -1.42
CHL1P22516 JIP4YDR475C 2631 nt6.2□□□□□ -1.42
CHL1P22516 YGR117CYGR117C 1431 nt6.19□□□□□ -1.42
CHL1P22516 SIT4YDL047W 936 nt6.19□□□□□ -1.42
CHL1P22516 YDL068WYDL068W 330 nt6.19□□□□□ -1.42
CHL1P22516 TFB3YDR460W 966 nt6.19□□□□□ -1.42
CHL1P22516 RPL40AYIL148W 387 nt6.19□□□□□ -1.42
CHL1P22516 RMP1YLR145W 606 nt6.19□□□□□ -1.42
CHL1P22516 DAD3YBR233W-A 285 nt6.19□□□□□ -1.42
CHL1P22516 HXK2YGL253W 1461 nt6.19□□□□□ -1.42
CHL1P22516 MKK1YOR231W 1527 nt6.19□□□□□ -1.42
CHL1P22516 YLR152CYLR152C 1731 nt6.19□□□□□ -1.42
CHL1P22516 COX1Q0045 1605 nt6.18□□□□□ -1.42
CHL1P22516 MSE1YOL033W 1611 nt6.18□□□□□ -1.42
CHL1P22516 VBA2YBR293W 1425 nt6.18□□□□□ -1.42
CHL1P22516 YDL085C-AYDL085C-A 207 nt6.18□□□□□ -1.42
CHL1P22516 SPC19YDR201W 498 nt6.18□□□□□ -1.42
CHL1P22516 YFL064CYFL064C 525 nt6.18□□□□□ -1.42
CHL1P22516 YMR316C-AYMR316C-A 312 nt6.18□□□□□ -1.42
CHL1P22516 YOL155W-AYOL155W-A 135 nt6.18□□□□□ -1.42
CHL1P22516 TOG1YER184C 2385 nt6.18□□□□□ -1.42
CHL1P22516 DBP9YLR276C 1785 nt6.18□□□□□ -1.42
CHL1P22516 YFR006WYFR006W 1608 nt6.17□□□□□ -1.42
CHL1P22516 MCD1YDL003W 1701 nt6.17□□□□□ -1.42
CHL1P22516 HXT15YDL245C 1704 nt6.17□□□□□ -1.42
CHL1P22516 HXT16YJR158W 1704 nt6.17□□□□□ -1.42
CHL1P22516 YDL211CYDL211C 1119 nt6.17□□□□□ -1.42
CHL1P22516 YDR015CYDR015C 240 nt6.17□□□□□ -1.42
CHL1P22516 YDR415CYDR415C 1125 nt6.17□□□□□ -1.42
CHL1P22516 YPT1YFL038C 621 nt6.17□□□□□ -1.42
CHL1P22516 tW(UCA)QtW(UCA)Q 74 nt6.17□□□□□ -1.42
CHL1P22516 YAL031W-AYAL031W-A 309 nt6.17□□□□□ -1.42
CHL1P22516 MDL1YLR188W 2088 nt6.17□□□□□ -1.42
CHL1P22516 ASF2YDL197C 1578 nt6.17□□□□□ -1.42
CHL1P22516 DBP3YGL078C 1572 nt6.17□□□□□ -1.42
CHL1P22516 RTK1YDL025C 1863 nt6.17□□□□□ -1.42
CHL1P22516 STP2YHR006W 1626 nt6.17□□□□□ -1.42
CHL1P22516 RAP1YNL216W 2484 nt6.17□□□□□ -1.42
CHL1P22516 LCB2YDR062W 1686 nt6.17□□□□□ -1.42
CHL1P22516 CTT1YGR088W 1689 nt6.17□□□□□ -1.42
Retrieved 100 of 7,029 protein–RNA pairs in 16.8 ms