Protein–RNA interactions for Protein: P20333

TNFRSF1B, Tumor necrosis factor receptor superfamily member 1B, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1BP20333 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC19.73■□□□□ 0.75
TNFRSF1BP20333 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TNFRSF1BP20333 OXCT2P1-201ENST00000447263 1535 ntBASIC19.73■□□□□ 0.75
TNFRSF1BP20333 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
TNFRSF1BP20333 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TNFRSF1BP20333 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TNFRSF1BP20333 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC19.73■□□□□ 0.75
TNFRSF1BP20333 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
TNFRSF1BP20333 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TNFRSF1BP20333 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TNFRSF1BP20333 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC19.73■□□□□ 0.75
TNFRSF1BP20333 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TNFRSF1BP20333 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TNFRSF1BP20333 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TNFRSF1BP20333 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TNFRSF1BP20333 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TNFRSF1BP20333 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC19.72■□□□□ 0.75
TNFRSF1BP20333 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
TNFRSF1BP20333 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC19.72■□□□□ 0.75
TNFRSF1BP20333 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TNFRSF1BP20333 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC19.72■□□□□ 0.75
TNFRSF1BP20333 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
TNFRSF1BP20333 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
TNFRSF1BP20333 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TNFRSF1BP20333 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC19.71■□□□□ 0.75
TNFRSF1BP20333 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
TNFRSF1BP20333 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TNFRSF1BP20333 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
TNFRSF1BP20333 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TNFRSF1BP20333 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
TNFRSF1BP20333 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
TNFRSF1BP20333 AC003102.1-202ENST00000563394 1796 ntBASIC19.71■□□□□ 0.75
TNFRSF1BP20333 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC19.71■□□□□ 0.75
TNFRSF1BP20333 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TNFRSF1BP20333 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TNFRSF1BP20333 SERBP1P1-201ENST00000396021 1160 ntBASIC19.71■□□□□ 0.75
TNFRSF1BP20333 TRIR-205ENST00000592273 783 ntTSL 3 BASIC19.71■□□□□ 0.75
TNFRSF1BP20333 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TNFRSF1BP20333 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TNFRSF1BP20333 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
TNFRSF1BP20333 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TNFRSF1BP20333 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC19.7■□□□□ 0.74
TNFRSF1BP20333 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
TNFRSF1BP20333 HES6-206ENST00000409574 738 ntTSL 2 BASIC19.7■□□□□ 0.74
TNFRSF1BP20333 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
TNFRSF1BP20333 SRR-208ENST00000576848 588 ntTSL 4 BASIC19.7■□□□□ 0.74
TNFRSF1BP20333 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC19.7■□□□□ 0.74
TNFRSF1BP20333 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC19.7■□□□□ 0.74
TNFRSF1BP20333 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC19.7■□□□□ 0.74
TNFRSF1BP20333 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
TNFRSF1BP20333 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TNFRSF1BP20333 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
TNFRSF1BP20333 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC19.7■□□□□ 0.74
TNFRSF1BP20333 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
TNFRSF1BP20333 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TNFRSF1BP20333 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
TNFRSF1BP20333 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
TNFRSF1BP20333 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC19.7■□□□□ 0.74
TNFRSF1BP20333 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TNFRSF1BP20333 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
TNFRSF1BP20333 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TNFRSF1BP20333 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
TNFRSF1BP20333 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
TNFRSF1BP20333 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
TNFRSF1BP20333 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
TNFRSF1BP20333 AP004607.7-201ENST00000527152 1677 ntBASIC19.69■□□□□ 0.74
TNFRSF1BP20333 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC19.69■□□□□ 0.74
TNFRSF1BP20333 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
TNFRSF1BP20333 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC19.69■□□□□ 0.74
TNFRSF1BP20333 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC19.69■□□□□ 0.74
TNFRSF1BP20333 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC19.69■□□□□ 0.74
TNFRSF1BP20333 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
TNFRSF1BP20333 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
TNFRSF1BP20333 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC19.69■□□□□ 0.74
TNFRSF1BP20333 TRIR-202ENST00000588213 841 ntTSL 3 BASIC19.69■□□□□ 0.74
TNFRSF1BP20333 MIR4466-201ENST00000606121 54 ntBASIC19.69■□□□□ 0.74
TNFRSF1BP20333 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC19.69■□□□□ 0.74
TNFRSF1BP20333 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC19.69■□□□□ 0.74
TNFRSF1BP20333 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TNFRSF1BP20333 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TNFRSF1BP20333 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
TNFRSF1BP20333 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC19.69■□□□□ 0.74
TNFRSF1BP20333 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC19.68■□□□□ 0.74
TNFRSF1BP20333 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC19.68■□□□□ 0.74
TNFRSF1BP20333 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
TNFRSF1BP20333 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TNFRSF1BP20333 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TNFRSF1BP20333 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
TNFRSF1BP20333 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC19.68■□□□□ 0.74
TNFRSF1BP20333 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TNFRSF1BP20333 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
TNFRSF1BP20333 AC092171.4-201ENST00000609130 632 ntBASIC19.68■□□□□ 0.74
TNFRSF1BP20333 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TNFRSF1BP20333 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
TNFRSF1BP20333 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TNFRSF1BP20333 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
TNFRSF1BP20333 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TNFRSF1BP20333 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TNFRSF1BP20333 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TNFRSF1BP20333 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 64.9 ms