Protein–RNA interactions for Protein: P18074

ERCC2, TFIIH basal transcription factor complex helicase XPD subunit, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2P18074 SP2-202ENST00000613139 908 ntTSL 5 BASIC21.93■■□□□ 1.1
ERCC2P18074 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
ERCC2P18074 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
ERCC2P18074 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
ERCC2P18074 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC21.92■■□□□ 1.1
ERCC2P18074 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC21.92■■□□□ 1.1
ERCC2P18074 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC21.92■■□□□ 1.1
ERCC2P18074 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
ERCC2P18074 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC21.92■■□□□ 1.1
ERCC2P18074 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC21.92■■□□□ 1.1
ERCC2P18074 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC21.92■■□□□ 1.1
ERCC2P18074 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
ERCC2P18074 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
ERCC2P18074 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC21.92■■□□□ 1.1
ERCC2P18074 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC21.91■■□□□ 1.1
ERCC2P18074 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
ERCC2P18074 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
ERCC2P18074 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
ERCC2P18074 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC21.91■■□□□ 1.1
ERCC2P18074 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC21.91■■□□□ 1.1
ERCC2P18074 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC21.91■■□□□ 1.1
ERCC2P18074 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC21.91■■□□□ 1.1
ERCC2P18074 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC21.91■■□□□ 1.1
ERCC2P18074 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC21.91■■□□□ 1.1
ERCC2P18074 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
ERCC2P18074 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC21.91■■□□□ 1.1
ERCC2P18074 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
ERCC2P18074 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
ERCC2P18074 TUB-203ENST00000534099 1759 ntTSL 2 BASIC21.9■■□□□ 1.1
ERCC2P18074 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
ERCC2P18074 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC21.9■■□□□ 1.1
ERCC2P18074 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
ERCC2P18074 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC21.9■■□□□ 1.1
ERCC2P18074 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
ERCC2P18074 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
ERCC2P18074 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC21.9■■□□□ 1.1
ERCC2P18074 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC21.9■■□□□ 1.1
ERCC2P18074 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
ERCC2P18074 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
ERCC2P18074 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
ERCC2P18074 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
ERCC2P18074 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC21.9■■□□□ 1.1
ERCC2P18074 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
ERCC2P18074 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC21.89■■□□□ 1.09
ERCC2P18074 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
ERCC2P18074 YBX1P1-201ENST00000445822 960 ntBASIC21.89■■□□□ 1.09
ERCC2P18074 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC21.89■■□□□ 1.09
ERCC2P18074 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC21.89■■□□□ 1.09
ERCC2P18074 CPT2-209ENST00000636935 803 ntTSL 5 BASIC21.89■■□□□ 1.09
ERCC2P18074 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
ERCC2P18074 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
ERCC2P18074 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC21.89■■□□□ 1.09
ERCC2P18074 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC21.89■■□□□ 1.09
ERCC2P18074 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
ERCC2P18074 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC21.88■■□□□ 1.09
ERCC2P18074 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
ERCC2P18074 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC21.88■■□□□ 1.09
ERCC2P18074 LINC02228-203ENST00000641970 1355 ntBASIC21.88■■□□□ 1.09
ERCC2P18074 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC21.88■■□□□ 1.09
ERCC2P18074 AC019069.1-201ENST00000610008 1333 ntBASIC21.88■■□□□ 1.09
ERCC2P18074 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
ERCC2P18074 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
ERCC2P18074 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC21.88■■□□□ 1.09
ERCC2P18074 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC21.88■■□□□ 1.09
ERCC2P18074 FXN-202ENST00000396364 980 ntTSL 5 BASIC21.88■■□□□ 1.09
ERCC2P18074 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
ERCC2P18074 AC123595.1-201ENST00000440769 1046 ntBASIC21.88■■□□□ 1.09
ERCC2P18074 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC21.88■■□□□ 1.09
ERCC2P18074 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
ERCC2P18074 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC21.88■■□□□ 1.09
ERCC2P18074 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
ERCC2P18074 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
ERCC2P18074 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC21.88■■□□□ 1.09
ERCC2P18074 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC21.88■■□□□ 1.09
ERCC2P18074 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC21.88■■□□□ 1.09
ERCC2P18074 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
ERCC2P18074 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
ERCC2P18074 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC21.88■■□□□ 1.09
ERCC2P18074 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
ERCC2P18074 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC21.87■■□□□ 1.09
ERCC2P18074 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC21.87■■□□□ 1.09
ERCC2P18074 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC21.87■■□□□ 1.09
ERCC2P18074 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC21.87■■□□□ 1.09
ERCC2P18074 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
ERCC2P18074 MFF-203ENST00000349901 1716 ntTSL 2 BASIC21.87■■□□□ 1.09
ERCC2P18074 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
ERCC2P18074 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
ERCC2P18074 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC21.87■■□□□ 1.09
ERCC2P18074 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC21.87■■□□□ 1.09
ERCC2P18074 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC21.87■■□□□ 1.09
ERCC2P18074 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
ERCC2P18074 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
ERCC2P18074 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
ERCC2P18074 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC21.87■■□□□ 1.09
ERCC2P18074 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC21.87■■□□□ 1.09
ERCC2P18074 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
ERCC2P18074 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
ERCC2P18074 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
ERCC2P18074 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
ERCC2P18074 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms