Protein–RNA interactions for Protein: P17252

PRKCA, Protein kinase C alpha type, humanhuman

Predictions only

Length 672 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCAP17252 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
PRKCAP17252 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
PRKCAP17252 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PRKCAP17252 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC19.61■□□□□ 0.73
PRKCAP17252 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PRKCAP17252 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
PRKCAP17252 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC19.61■□□□□ 0.73
PRKCAP17252 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
PRKCAP17252 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
PRKCAP17252 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC19.61■□□□□ 0.73
PRKCAP17252 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PRKCAP17252 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
PRKCAP17252 MIR572-201ENST00000384983 95 ntBASIC19.61■□□□□ 0.73
PRKCAP17252 LHPP-203ENST00000392757 840 ntTSL 3 BASIC19.61■□□□□ 0.73
PRKCAP17252 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC19.61■□□□□ 0.73
PRKCAP17252 STOX2-205ENST00000513034 807 ntTSL 3 BASIC19.61■□□□□ 0.73
PRKCAP17252 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC19.61■□□□□ 0.73
PRKCAP17252 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PRKCAP17252 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PRKCAP17252 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC19.61■□□□□ 0.73
PRKCAP17252 AF106564.1-201ENST00000607058 2553 ntBASIC19.61■□□□□ 0.73
PRKCAP17252 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
PRKCAP17252 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
PRKCAP17252 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC19.61■□□□□ 0.73
PRKCAP17252 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
PRKCAP17252 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
PRKCAP17252 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PRKCAP17252 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PRKCAP17252 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PRKCAP17252 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC19.6■□□□□ 0.73
PRKCAP17252 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
PRKCAP17252 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC19.6■□□□□ 0.73
PRKCAP17252 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
PRKCAP17252 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
PRKCAP17252 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC19.6■□□□□ 0.73
PRKCAP17252 SMUG1P1-201ENST00000590640 811 ntBASIC19.6■□□□□ 0.73
PRKCAP17252 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
PRKCAP17252 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
PRKCAP17252 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
PRKCAP17252 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
PRKCAP17252 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
PRKCAP17252 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC19.6■□□□□ 0.73
PRKCAP17252 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PRKCAP17252 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PRKCAP17252 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
PRKCAP17252 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PRKCAP17252 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PRKCAP17252 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
PRKCAP17252 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC19.59■□□□□ 0.73
PRKCAP17252 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
PRKCAP17252 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC19.59■□□□□ 0.73
PRKCAP17252 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC19.59■□□□□ 0.73
PRKCAP17252 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PRKCAP17252 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PRKCAP17252 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
PRKCAP17252 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
PRKCAP17252 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC19.59■□□□□ 0.73
PRKCAP17252 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
PRKCAP17252 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC19.58■□□□□ 0.73
PRKCAP17252 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
PRKCAP17252 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
PRKCAP17252 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
PRKCAP17252 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.73
PRKCAP17252 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
PRKCAP17252 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
PRKCAP17252 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
PRKCAP17252 RHOF-204ENST00000537265 699 ntTSL 2 BASIC19.58■□□□□ 0.72
PRKCAP17252 AC105233.4-201ENST00000642045 216 ntBASIC19.58■□□□□ 0.72
PRKCAP17252 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
PRKCAP17252 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
PRKCAP17252 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
PRKCAP17252 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
PRKCAP17252 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
PRKCAP17252 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC19.57■□□□□ 0.72
PRKCAP17252 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
PRKCAP17252 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
PRKCAP17252 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PRKCAP17252 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
PRKCAP17252 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC19.57■□□□□ 0.72
PRKCAP17252 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
PRKCAP17252 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC19.57■□□□□ 0.72
PRKCAP17252 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
PRKCAP17252 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC19.56■□□□□ 0.72
PRKCAP17252 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
PRKCAP17252 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PRKCAP17252 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PRKCAP17252 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
PRKCAP17252 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
PRKCAP17252 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PRKCAP17252 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC19.56■□□□□ 0.72
PRKCAP17252 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
PRKCAP17252 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
PRKCAP17252 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PRKCAP17252 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC19.56■□□□□ 0.72
PRKCAP17252 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
PRKCAP17252 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC19.56■□□□□ 0.72
PRKCAP17252 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC19.56■□□□□ 0.72
PRKCAP17252 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PRKCAP17252 C11orf96-202ENST00000528572 1834 ntBASIC19.55■□□□□ 0.72
PRKCAP17252 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms