Protein–RNA interactions for Protein: P16333

NCK1, Cytoplasmic protein NCK1, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1P16333 KRT125P-201ENST00000546827 989 ntBASIC20.06■□□□□ 0.8
NCK1P16333 AC010997.5-201ENST00000609182 354 ntBASIC20.06■□□□□ 0.8
NCK1P16333 AL121603.2-201ENST00000557373 2117 ntBASIC20.06■□□□□ 0.8
NCK1P16333 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC20.06■□□□□ 0.8
NCK1P16333 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
NCK1P16333 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
NCK1P16333 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
NCK1P16333 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
NCK1P16333 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
NCK1P16333 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
NCK1P16333 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
NCK1P16333 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC20.05■□□□□ 0.8
NCK1P16333 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
NCK1P16333 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC20.05■□□□□ 0.8
NCK1P16333 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
NCK1P16333 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
NCK1P16333 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC20.05■□□□□ 0.8
NCK1P16333 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
NCK1P16333 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
NCK1P16333 AC133637.1-201ENST00000624115 1537 ntBASIC20.05■□□□□ 0.8
NCK1P16333 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
NCK1P16333 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
NCK1P16333 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC20.04■□□□□ 0.8
NCK1P16333 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
NCK1P16333 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
NCK1P16333 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
NCK1P16333 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC20.04■□□□□ 0.8
NCK1P16333 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
NCK1P16333 LSM4-201ENST00000252816 986 ntTSL 2 BASIC20.04■□□□□ 0.8
NCK1P16333 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
NCK1P16333 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC20.04■□□□□ 0.8
NCK1P16333 MIR4787-201ENST00000607364 84 ntBASIC20.04■□□□□ 0.8
NCK1P16333 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
NCK1P16333 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
NCK1P16333 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC20.04■□□□□ 0.8
NCK1P16333 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
NCK1P16333 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC20.04■□□□□ 0.8
NCK1P16333 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC20.04■□□□□ 0.8
NCK1P16333 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
NCK1P16333 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
NCK1P16333 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
NCK1P16333 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
NCK1P16333 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
NCK1P16333 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
NCK1P16333 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
NCK1P16333 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
NCK1P16333 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
NCK1P16333 AC006455.2-201ENST00000429931 906 ntBASIC20.03■□□□□ 0.8
NCK1P16333 TSPY9P-201ENST00000440215 945 ntBASIC20.03■□□□□ 0.8
NCK1P16333 TSPY11P-201ENST00000442607 1045 ntBASIC20.03■□□□□ 0.8
NCK1P16333 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
NCK1P16333 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
NCK1P16333 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC20.03■□□□□ 0.8
NCK1P16333 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC20.03■□□□□ 0.8
NCK1P16333 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC20.03■□□□□ 0.8
NCK1P16333 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
NCK1P16333 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
NCK1P16333 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
NCK1P16333 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC20.03■□□□□ 0.8
NCK1P16333 AL049796.1-201ENST00000565336 1766 ntBASIC20.03■□□□□ 0.8
NCK1P16333 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC20.03■□□□□ 0.8
NCK1P16333 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC20.02■□□□□ 0.8
NCK1P16333 OXCT2P1-201ENST00000447263 1535 ntBASIC20.02■□□□□ 0.8
NCK1P16333 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC20.02■□□□□ 0.8
NCK1P16333 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
NCK1P16333 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
NCK1P16333 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
NCK1P16333 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
NCK1P16333 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
NCK1P16333 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
NCK1P16333 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC20.02■□□□□ 0.8
NCK1P16333 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
NCK1P16333 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
NCK1P16333 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC20.02■□□□□ 0.8
NCK1P16333 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
NCK1P16333 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
NCK1P16333 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
NCK1P16333 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
NCK1P16333 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
NCK1P16333 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC20.01■□□□□ 0.79
NCK1P16333 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
NCK1P16333 STX4-202ENST00000394998 1498 ntTSL 2 BASIC20.01■□□□□ 0.79
NCK1P16333 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC20.01■□□□□ 0.79
NCK1P16333 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
NCK1P16333 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC20.01■□□□□ 0.79
NCK1P16333 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC20.01■□□□□ 0.79
NCK1P16333 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC20.01■□□□□ 0.79
NCK1P16333 pRNA.6-201ENST00000610482 90 ntBASIC20.01■□□□□ 0.79
NCK1P16333 pRNA.5-201ENST00000612139 90 ntBASIC20.01■□□□□ 0.79
NCK1P16333 pRNA.11-201ENST00000618423 90 ntBASIC20.01■□□□□ 0.79
NCK1P16333 pRNA.13-201ENST00000619112 90 ntBASIC20.01■□□□□ 0.79
NCK1P16333 AL117332.1-201ENST00000622628 974 ntBASIC20.01■□□□□ 0.79
NCK1P16333 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
NCK1P16333 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC20.01■□□□□ 0.79
NCK1P16333 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
NCK1P16333 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC20■□□□□ 0.79
NCK1P16333 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
NCK1P16333 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
NCK1P16333 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC20■□□□□ 0.79
NCK1P16333 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 50.2 ms