Protein–RNA interactions for Protein: P0CH09

RPL40B, Ubiquitin-60S ribosomal protein L40, yeastyeast

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPL40BP0CH09 YDR491CYDR491C 492 nt2.43□□□□□ -2.02
RPL40BP0CH09 TIS11YLR136C 858 nt2.43□□□□□ -2.02
RPL40BP0CH09 YOR186WYOR186W 435 nt2.43□□□□□ -2.02
RPL40BP0CH09 MCA1YOR197W 1299 nt2.43□□□□□ -2.02
RPL40BP0CH09 SAS5YOR213C 747 nt2.43□□□□□ -2.02
RPL40BP0CH09 YOR289WYOR289W 756 nt2.43□□□□□ -2.02
RPL40BP0CH09 MCM16YPR046W 546 nt2.43□□□□□ -2.02
RPL40BP0CH09 PHO88YBR106W 567 nt2.43□□□□□ -2.02
RPL40BP0CH09 YBR255C-AYBR255C-A 363 nt2.43□□□□□ -2.02
RPL40BP0CH09 MGM1YOR211C 2646 nt2.43□□□□□ -2.02
RPL40BP0CH09 PUF2YPR042C 3228 nt2.43□□□□□ -2.02
RPL40BP0CH09 YCR045W-AYCR045W-A 351 nt2.42□□□□□ -2.02
RPL40BP0CH09 YER165C-AYER165C-A 357 nt2.42□□□□□ -2.02
RPL40BP0CH09 PEX4YGR133W 552 nt2.42□□□□□ -2.02
RPL40BP0CH09 LSM1YJL124C 519 nt2.42□□□□□ -2.02
RPL40BP0CH09 RPS21BYJL136C 264 nt2.42□□□□□ -2.02
RPL40BP0CH09 ATG27YJL178C 816 nt2.42□□□□□ -2.02
RPL40BP0CH09 RUF21RUF21 707 nt2.42□□□□□ -2.02
RPL40BP0CH09 TMA16YOR252W 537 nt2.42□□□□□ -2.02
RPL40BP0CH09 IRC8YJL051W 2469 nt2.42□□□□□ -2.02
RPL40BP0CH09 VPS27YNR006W 1869 nt2.41□□□□□ -2.02
RPL40BP0CH09 YEL032C-AYEL032C-A 162 nt2.41□□□□□ -2.02
RPL40BP0CH09 YVH1YIR026C 1095 nt2.41□□□□□ -2.02
RPL40BP0CH09 SYS1YJL004C 612 nt2.41□□□□□ -2.02
RPL40BP0CH09 LCL1YPL056C 306 nt2.41□□□□□ -2.02
RPL40BP0CH09 ALG11YNL048W 1647 nt2.41□□□□□ -2.02
RPL40BP0CH09 PRM15YMR278W 1869 nt2.41□□□□□ -2.02
RPL40BP0CH09 SLP1YOR154W 1764 nt2.41□□□□□ -2.02
RPL40BP0CH09 DXO1YDR370C 1329 nt2.41□□□□□ -2.02
RPL40BP0CH09 BUD6YLR319C 2367 nt2.41□□□□□ -2.02
RPL40BP0CH09 TSC11YER093C 4293 nt2.4□□□□□ -2.02
RPL40BP0CH09 ATP7YKL016C 525 nt2.4□□□□□ -2.03
RPL40BP0CH09 YBR085C-AYBR085C-A 258 nt2.4□□□□□ -2.03
RPL40BP0CH09 CTR86YCR054C 1692 nt2.4□□□□□ -2.03
RPL40BP0CH09 SMP3YOR149C 1551 nt2.4□□□□□ -2.03
RPL40BP0CH09 YJR098CYJR098C 1971 nt2.4□□□□□ -2.03
RPL40BP0CH09 VAC14YLR386W 2643 nt2.39□□□□□ -2.03
RPL40BP0CH09 SSF2YDR312W 1362 nt2.39□□□□□ -2.03
RPL40BP0CH09 COS12YGL263W 1143 nt2.39□□□□□ -2.03
RPL40BP0CH09 UPS2YLR168C 693 nt2.39□□□□□ -2.03
RPL40BP0CH09 SSU72YNL222W 621 nt2.39□□□□□ -2.03
RPL40BP0CH09 YOL079WYOL079W 399 nt2.39□□□□□ -2.03
RPL40BP0CH09 YPL073CYPL073C 486 nt2.39□□□□□ -2.03
RPL40BP0CH09 SRO77YBL106C 3033 nt2.39□□□□□ -2.03
RPL40BP0CH09 KSP1YHR082C 3090 nt2.39□□□□□ -2.03
RPL40BP0CH09 AXL1YPR122W 3627 nt2.39□□□□□ -2.03
RPL40BP0CH09 FLO11YIR019C 4104 nt2.39□□□□□ -2.03
RPL40BP0CH09 ALG1YBR110W 1350 nt2.38□□□□□ -2.03
RPL40BP0CH09 SDC25YLL016W 3147 nt2.38□□□□□ -2.03
RPL40BP0CH09 TFC1YBR123C 1950 nt2.38□□□□□ -2.03
RPL40BP0CH09 IKI3YLR384C 4050 nt2.38□□□□□ -2.03
RPL40BP0CH09 PEX10YDR265W 1014 nt2.38□□□□□ -2.03
RPL40BP0CH09 BNS1YGR230W 414 nt2.38□□□□□ -2.03
RPL40BP0CH09 RPL14BYHL001W 417 nt2.38□□□□□ -2.03
RPL40BP0CH09 ERP1YAR002C-A 660 nt2.38□□□□□ -2.03
RPL40BP0CH09 YLR154C-HYLR154C-H 132 nt2.38□□□□□ -2.03
RPL40BP0CH09 YLR156C-AYLR156C-A 132 nt2.38□□□□□ -2.03
RPL40BP0CH09 YLR157C-CYLR157C-C 132 nt2.38□□□□□ -2.03
RPL40BP0CH09 PRM9YAR031W 897 nt2.38□□□□□ -2.03
RPL40BP0CH09 YLR159C-AYLR159C-A 132 nt2.38□□□□□ -2.03
RPL40BP0CH09 GCD7YLR291C 1146 nt2.38□□□□□ -2.03
RPL40BP0CH09 JIP3YLR331C 378 nt2.38□□□□□ -2.03
RPL40BP0CH09 SCD5YOR329C 2619 nt2.38□□□□□ -2.03
RPL40BP0CH09 YPR147CYPR147C 915 nt2.38□□□□□ -2.03
RPL40BP0CH09 SLH1YGR271W 5904 nt2.38□□□□□ -2.03
RPL40BP0CH09 RAD7YJR052W 1698 nt2.37□□□□□ -2.03
RPL40BP0CH09 ROM1YGR070W 3468 nt2.37□□□□□ -2.03
RPL40BP0CH09 YHB1YGR234W 1200 nt2.37□□□□□ -2.03
RPL40BP0CH09 YLR230WYLR230W 306 nt2.37□□□□□ -2.03
RPL40BP0CH09 HUG1YML058W-A 207 nt2.37□□□□□ -2.03
RPL40BP0CH09 YMR141CYMR141C 309 nt2.37□□□□□ -2.03
RPL40BP0CH09 PNO1YOR145C 825 nt2.37□□□□□ -2.03
RPL40BP0CH09 INP53YOR109W 3324 nt2.37□□□□□ -2.03
RPL40BP0CH09 RAD5YLR032W 3510 nt2.37□□□□□ -2.03
RPL40BP0CH09 UBP12YJL197W 3765 nt2.37□□□□□ -2.03
RPL40BP0CH09 GDI1YER136W 1356 nt2.36□□□□□ -2.03
RPL40BP0CH09 ESL2YKR096W 3588 nt2.36□□□□□ -2.03
RPL40BP0CH09 TOP1YOL006C 2310 nt2.36□□□□□ -2.03
RPL40BP0CH09 TRM13YOL125W 1431 nt2.36□□□□□ -2.03
RPL40BP0CH09 LIF1YGL090W 1266 nt2.36□□□□□ -2.03
RPL40BP0CH09 YIP5YGL161C 933 nt2.36□□□□□ -2.03
RPL40BP0CH09 YGR291CYGR291C 222 nt2.36□□□□□ -2.03
RPL40BP0CH09 YLR124WYLR124W 345 nt2.36□□□□□ -2.03
RPL40BP0CH09 GLO1YML004C 981 nt2.36□□□□□ -2.03
RPL40BP0CH09 EBS1YDR206W 2655 nt2.36□□□□□ -2.03
RPL40BP0CH09 YAT2YER024W 2772 nt2.36□□□□□ -2.03
RPL40BP0CH09 RTT10YPL183C 3042 nt2.36□□□□□ -2.03
RPL40BP0CH09 ESC1YMR219W 4977 nt2.36□□□□□ -2.03
RPL40BP0CH09 OAF3YKR064W 2592 nt2.35□□□□□ -2.03
RPL40BP0CH09 FPR1YNL135C 345 nt2.35□□□□□ -2.03
RPL40BP0CH09 YOR050CYOR050C 348 nt2.35□□□□□ -2.03
RPL40BP0CH09 PEX8YGR077C 1770 nt2.35□□□□□ -2.03
RPL40BP0CH09 TEC1YBR083W 1461 nt2.34□□□□□ -2.03
RPL40BP0CH09 YDR149CYDR149C 708 nt2.34□□□□□ -2.03
RPL40BP0CH09 CMR3YPR013C 954 nt2.34□□□□□ -2.03
RPL40BP0CH09 COS111YBR203W 2775 nt2.34□□□□□ -2.04
RPL40BP0CH09 RPN5YDL147W 1338 nt2.34□□□□□ -2.04
RPL40BP0CH09 BNR1YIL159W 4128 nt2.34□□□□□ -2.04
RPL40BP0CH09 EDS1YBR033W 2760 nt2.33□□□□□ -2.04
RPL40BP0CH09 FRE2YKL220C 2136 nt2.33□□□□□ -2.04
Retrieved 100 of 7,029 protein–RNA pairs in 14.9 ms