Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
COL5A2P05997 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
COL5A2P05997 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC28.41■■■□□ 2.14
COL5A2P05997 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC28.41■■■□□ 2.14
COL5A2P05997 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC28.41■■■□□ 2.14
COL5A2P05997 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC28.41■■■□□ 2.14
COL5A2P05997 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC28.41■■■□□ 2.14
COL5A2P05997 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC28.41■■■□□ 2.14
COL5A2P05997 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
COL5A2P05997 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
COL5A2P05997 BAALC-201ENST00000297574 801 ntTSL 3 BASIC28.4■■■□□ 2.14
COL5A2P05997 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC28.4■■■□□ 2.14
COL5A2P05997 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC28.4■■■□□ 2.14
COL5A2P05997 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
COL5A2P05997 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC28.4■■■□□ 2.14
COL5A2P05997 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC28.4■■■□□ 2.14
COL5A2P05997 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC28.4■■■□□ 2.14
COL5A2P05997 RPS2P4-201ENST00000476944 856 ntBASIC28.4■■■□□ 2.14
COL5A2P05997 AC026366.1-201ENST00000488803 879 ntBASIC28.4■■■□□ 2.14
COL5A2P05997 UNC93B4-201ENST00000505679 747 ntBASIC28.4■■■□□ 2.14
COL5A2P05997 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC28.4■■■□□ 2.14
COL5A2P05997 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC28.4■■■□□ 2.14
COL5A2P05997 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC28.4■■■□□ 2.14
COL5A2P05997 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC28.4■■■□□ 2.14
COL5A2P05997 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC28.4■■■□□ 2.14
COL5A2P05997 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC28.4■■■□□ 2.14
COL5A2P05997 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC28.4■■■□□ 2.14
COL5A2P05997 AP003097.1-201ENST00000530657 1135 ntBASIC28.4■■■□□ 2.14
COL5A2P05997 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC28.4■■■□□ 2.14
COL5A2P05997 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC28.4■■■□□ 2.14
COL5A2P05997 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC28.4■■■□□ 2.14
COL5A2P05997 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC28.39■■■□□ 2.14
COL5A2P05997 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.14
COL5A2P05997 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC28.39■■■□□ 2.14
COL5A2P05997 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.14
COL5A2P05997 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC28.39■■■□□ 2.13
COL5A2P05997 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.13
COL5A2P05997 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC28.39■■■□□ 2.13
COL5A2P05997 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC28.39■■■□□ 2.13
COL5A2P05997 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC28.39■■■□□ 2.13
COL5A2P05997 USP36-216ENST00000589424 970 ntTSL 5 BASIC28.39■■■□□ 2.13
COL5A2P05997 AC073648.6-201ENST00000641589 218 ntBASIC28.39■■■□□ 2.13
COL5A2P05997 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC28.39■■■□□ 2.13
COL5A2P05997 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC28.38■■■□□ 2.13
COL5A2P05997 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC28.38■■■□□ 2.13
COL5A2P05997 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC28.38■■■□□ 2.13
COL5A2P05997 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC28.38■■■□□ 2.13
COL5A2P05997 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC28.38■■■□□ 2.13
COL5A2P05997 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC28.38■■■□□ 2.13
COL5A2P05997 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC28.38■■■□□ 2.13
COL5A2P05997 KRT16P2-201ENST00000414673 1423 ntBASIC28.38■■■□□ 2.13
COL5A2P05997 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC28.37■■■□□ 2.13
COL5A2P05997 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
COL5A2P05997 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
COL5A2P05997 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
COL5A2P05997 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC28.37■■■□□ 2.13
COL5A2P05997 RNF146-206ENST00000480444 843 ntTSL 2 BASIC28.37■■■□□ 2.13
COL5A2P05997 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC28.37■■■□□ 2.13
COL5A2P05997 AC008175.2-201ENST00000612840 297 ntBASIC28.37■■■□□ 2.13
COL5A2P05997 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
COL5A2P05997 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC28.37■■■□□ 2.13
COL5A2P05997 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC28.37■■■□□ 2.13
COL5A2P05997 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
COL5A2P05997 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
COL5A2P05997 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC28.36■■■□□ 2.13
COL5A2P05997 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC28.36■■■□□ 2.13
COL5A2P05997 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC28.36■■■□□ 2.13
COL5A2P05997 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
COL5A2P05997 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC28.36■■■□□ 2.13
COL5A2P05997 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC28.36■■■□□ 2.13
COL5A2P05997 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC28.36■■■□□ 2.13
COL5A2P05997 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC28.36■■■□□ 2.13
COL5A2P05997 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC28.36■■■□□ 2.13
COL5A2P05997 AC120498.10-201ENST00000621827 505 ntBASIC28.36■■■□□ 2.13
COL5A2P05997 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC28.36■■■□□ 2.13
COL5A2P05997 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC28.36■■■□□ 2.13
COL5A2P05997 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC28.36■■■□□ 2.13
COL5A2P05997 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC28.36■■■□□ 2.13
COL5A2P05997 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC28.36■■■□□ 2.13
COL5A2P05997 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC28.36■■■□□ 2.13
COL5A2P05997 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC28.36■■■□□ 2.13
COL5A2P05997 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC28.35■■■□□ 2.13
COL5A2P05997 OR2A1-AS1-201ENST00000462305 773 ntBASIC28.35■■■□□ 2.13
COL5A2P05997 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC28.35■■■□□ 2.13
COL5A2P05997 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC28.35■■■□□ 2.13
COL5A2P05997 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC28.35■■■□□ 2.13
COL5A2P05997 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC28.35■■■□□ 2.13
COL5A2P05997 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC28.35■■■□□ 2.13
COL5A2P05997 AC243732.1-201ENST00000612648 864 ntBASIC28.35■■■□□ 2.13
COL5A2P05997 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
COL5A2P05997 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
COL5A2P05997 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
COL5A2P05997 PREB-202ENST00000406567 1910 ntTSL 5 BASIC28.35■■■□□ 2.13
COL5A2P05997 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC28.34■■■□□ 2.13
COL5A2P05997 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC28.34■■■□□ 2.13
COL5A2P05997 POU5F1P4-201ENST00000413175 1085 ntBASIC28.34■■■□□ 2.13
COL5A2P05997 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC28.34■■■□□ 2.13
COL5A2P05997 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC28.34■■■□□ 2.13
COL5A2P05997 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC28.34■■■□□ 2.13
COL5A2P05997 AL591742.1-201ENST00000604433 565 ntBASIC28.34■■■□□ 2.13
Retrieved 100 of 98,524 protein–RNA pairs in 17.4 ms