Protein–RNA interactions for Protein: P04908

HIST1H2AB, Histone H2A type 1-B/E, humanhuman

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H2ABP04908 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC19.34■□□□□ 0.69
HIST1H2ABP04908 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC19.34■□□□□ 0.69
HIST1H2ABP04908 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
HIST1H2ABP04908 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC19.34■□□□□ 0.69
HIST1H2ABP04908 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
HIST1H2ABP04908 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
HIST1H2ABP04908 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
HIST1H2ABP04908 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
HIST1H2ABP04908 AP004607.7-201ENST00000527152 1677 ntBASIC19.33■□□□□ 0.69
HIST1H2ABP04908 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC19.33■□□□□ 0.69
HIST1H2ABP04908 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
HIST1H2ABP04908 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
HIST1H2ABP04908 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
HIST1H2ABP04908 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC19.33■□□□□ 0.69
HIST1H2ABP04908 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
HIST1H2ABP04908 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
HIST1H2ABP04908 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
HIST1H2ABP04908 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
HIST1H2ABP04908 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC19.33■□□□□ 0.68
HIST1H2ABP04908 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
HIST1H2ABP04908 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
HIST1H2ABP04908 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
HIST1H2ABP04908 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
HIST1H2ABP04908 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
HIST1H2ABP04908 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC19.33■□□□□ 0.68
HIST1H2ABP04908 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.68
HIST1H2ABP04908 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
HIST1H2ABP04908 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
HIST1H2ABP04908 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
HIST1H2ABP04908 ME2-206ENST00000638410 2289 ntTSL 5 BASIC19.32■□□□□ 0.68
HIST1H2ABP04908 ME2-210ENST00000639255 2262 ntTSL 5 BASIC19.32■□□□□ 0.68
HIST1H2ABP04908 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC19.32■□□□□ 0.68
HIST1H2ABP04908 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
HIST1H2ABP04908 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
HIST1H2ABP04908 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC19.32■□□□□ 0.68
HIST1H2ABP04908 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC19.32■□□□□ 0.68
HIST1H2ABP04908 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC19.32■□□□□ 0.68
HIST1H2ABP04908 PBX2P1-201ENST00000493219 1291 ntBASIC19.32■□□□□ 0.68
HIST1H2ABP04908 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC19.32■□□□□ 0.68
HIST1H2ABP04908 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
HIST1H2ABP04908 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
HIST1H2ABP04908 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
HIST1H2ABP04908 TUB-203ENST00000534099 1759 ntTSL 2 BASIC19.32■□□□□ 0.68
HIST1H2ABP04908 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
HIST1H2ABP04908 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
HIST1H2ABP04908 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC19.31■□□□□ 0.68
HIST1H2ABP04908 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
HIST1H2ABP04908 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
HIST1H2ABP04908 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
HIST1H2ABP04908 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC19.31■□□□□ 0.68
HIST1H2ABP04908 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
HIST1H2ABP04908 AC096631.2-201ENST00000436136 790 ntBASIC19.31■□□□□ 0.68
HIST1H2ABP04908 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC19.31■□□□□ 0.68
HIST1H2ABP04908 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC19.31■□□□□ 0.68
HIST1H2ABP04908 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
HIST1H2ABP04908 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC19.31■□□□□ 0.68
HIST1H2ABP04908 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
HIST1H2ABP04908 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC19.31■□□□□ 0.68
HIST1H2ABP04908 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC19.31■□□□□ 0.68
HIST1H2ABP04908 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
HIST1H2ABP04908 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC19.31■□□□□ 0.68
HIST1H2ABP04908 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
HIST1H2ABP04908 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC19.3■□□□□ 0.68
HIST1H2ABP04908 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC19.3■□□□□ 0.68
HIST1H2ABP04908 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
HIST1H2ABP04908 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
HIST1H2ABP04908 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC19.3■□□□□ 0.68
HIST1H2ABP04908 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
HIST1H2ABP04908 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC19.3■□□□□ 0.68
HIST1H2ABP04908 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC19.3■□□□□ 0.68
HIST1H2ABP04908 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC19.3■□□□□ 0.68
HIST1H2ABP04908 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
HIST1H2ABP04908 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC19.3■□□□□ 0.68
HIST1H2ABP04908 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC19.3■□□□□ 0.68
HIST1H2ABP04908 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC19.3■□□□□ 0.68
HIST1H2ABP04908 AC008764.7-201ENST00000593779 1081 ntBASIC19.3■□□□□ 0.68
HIST1H2ABP04908 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
HIST1H2ABP04908 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
HIST1H2ABP04908 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
HIST1H2ABP04908 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
HIST1H2ABP04908 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
HIST1H2ABP04908 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
HIST1H2ABP04908 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC19.29■□□□□ 0.68
HIST1H2ABP04908 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC19.29■□□□□ 0.68
HIST1H2ABP04908 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
HIST1H2ABP04908 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
HIST1H2ABP04908 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
HIST1H2ABP04908 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
HIST1H2ABP04908 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
HIST1H2ABP04908 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC19.29■□□□□ 0.68
HIST1H2ABP04908 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC19.29■□□□□ 0.68
HIST1H2ABP04908 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
HIST1H2ABP04908 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC19.29■□□□□ 0.68
HIST1H2ABP04908 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
HIST1H2ABP04908 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
HIST1H2ABP04908 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
HIST1H2ABP04908 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC19.28■□□□□ 0.68
HIST1H2ABP04908 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
HIST1H2ABP04908 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
HIST1H2ABP04908 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms