Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC17.88■□□□□ 0.45
CD74P04233 RARG-204ENST00000543726 1779 ntTSL 2 BASIC17.88■□□□□ 0.45
CD74P04233 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CD74P04233 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CD74P04233 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CD74P04233 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CD74P04233 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
CD74P04233 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
CD74P04233 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC17.87■□□□□ 0.45
CD74P04233 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC17.87■□□□□ 0.45
CD74P04233 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
CD74P04233 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
CD74P04233 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC17.87■□□□□ 0.45
CD74P04233 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC17.87■□□□□ 0.45
CD74P04233 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CD74P04233 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
CD74P04233 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CD74P04233 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CD74P04233 ATP5G2P3-201ENST00000429083 425 ntBASIC17.87■□□□□ 0.45
CD74P04233 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC17.87■□□□□ 0.45
CD74P04233 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CD74P04233 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC17.87■□□□□ 0.45
CD74P04233 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CD74P04233 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
CD74P04233 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CD74P04233 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CD74P04233 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC17.87■□□□□ 0.45
CD74P04233 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC17.87■□□□□ 0.45
CD74P04233 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CD74P04233 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
CD74P04233 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
CD74P04233 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CD74P04233 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
CD74P04233 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC17.86■□□□□ 0.45
CD74P04233 AC073314.1-201ENST00000568729 2216 ntBASIC17.86■□□□□ 0.45
CD74P04233 AC004987.1-201ENST00000428627 508 ntBASIC17.86■□□□□ 0.45
CD74P04233 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC17.86■□□□□ 0.45
CD74P04233 NTF6A-201ENST00000591175 560 ntBASIC17.86■□□□□ 0.45
CD74P04233 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
CD74P04233 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
CD74P04233 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC17.86■□□□□ 0.45
CD74P04233 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
CD74P04233 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CD74P04233 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
CD74P04233 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CD74P04233 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CD74P04233 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC17.86■□□□□ 0.45
CD74P04233 AC006128.1-201ENST00000624704 1661 ntBASIC17.86■□□□□ 0.45
CD74P04233 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CD74P04233 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
CD74P04233 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC17.86■□□□□ 0.45
CD74P04233 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
CD74P04233 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CD74P04233 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CD74P04233 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
CD74P04233 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC17.86■□□□□ 0.45
CD74P04233 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CD74P04233 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CD74P04233 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
CD74P04233 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CD74P04233 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CD74P04233 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CD74P04233 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
CD74P04233 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
CD74P04233 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CD74P04233 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC17.85■□□□□ 0.45
CD74P04233 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC17.85■□□□□ 0.45
CD74P04233 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC17.85■□□□□ 0.45
CD74P04233 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CD74P04233 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
CD74P04233 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC17.85■□□□□ 0.45
CD74P04233 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC17.85■□□□□ 0.45
CD74P04233 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CD74P04233 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
CD74P04233 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
CD74P04233 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CD74P04233 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CD74P04233 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
CD74P04233 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CD74P04233 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CD74P04233 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CD74P04233 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CD74P04233 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CD74P04233 AC021242.3-201ENST00000607598 1377 ntBASIC17.84■□□□□ 0.45
CD74P04233 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC17.84■□□□□ 0.45
CD74P04233 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CD74P04233 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CD74P04233 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC17.84■□□□□ 0.45
CD74P04233 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
CD74P04233 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CD74P04233 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC17.84■□□□□ 0.45
CD74P04233 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CD74P04233 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC17.84■□□□□ 0.45
CD74P04233 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
CD74P04233 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
CD74P04233 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CD74P04233 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC17.84■□□□□ 0.45
CD74P04233 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
CD74P04233 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CD74P04233 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms