Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
APOBP04114 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
APOBP04114 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC13.47□□□□□ -0.25
APOBP04114 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC13.47□□□□□ -0.25
APOBP04114 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC13.47□□□□□ -0.25
APOBP04114 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
APOBP04114 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
APOBP04114 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
APOBP04114 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
APOBP04114 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC13.47□□□□□ -0.25
APOBP04114 AC069236.1-201ENST00000604339 616 ntBASIC13.47□□□□□ -0.25
APOBP04114 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC13.47□□□□□ -0.25
APOBP04114 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC13.47□□□□□ -0.25
APOBP04114 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
APOBP04114 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
APOBP04114 AC097658.1-201ENST00000475555 843 ntBASIC13.47□□□□□ -0.25
APOBP04114 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC13.47□□□□□ -0.25
APOBP04114 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
APOBP04114 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC13.46□□□□□ -0.25
APOBP04114 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
APOBP04114 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
APOBP04114 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC13.46□□□□□ -0.25
APOBP04114 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC13.46□□□□□ -0.25
APOBP04114 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC13.46□□□□□ -0.25
APOBP04114 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC13.46□□□□□ -0.25
APOBP04114 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC13.46□□□□□ -0.25
APOBP04114 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC13.46□□□□□ -0.25
APOBP04114 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC13.46□□□□□ -0.25
APOBP04114 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
APOBP04114 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
APOBP04114 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC13.46□□□□□ -0.25
APOBP04114 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC13.46□□□□□ -0.25
APOBP04114 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
APOBP04114 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC13.46□□□□□ -0.25
APOBP04114 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
APOBP04114 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
APOBP04114 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.26
APOBP04114 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC13.46□□□□□ -0.26
APOBP04114 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC13.46□□□□□ -0.26
APOBP04114 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC13.46□□□□□ -0.26
APOBP04114 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC13.46□□□□□ -0.26
APOBP04114 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
APOBP04114 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.26
APOBP04114 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.26
APOBP04114 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC13.46□□□□□ -0.26
APOBP04114 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC13.46□□□□□ -0.26
APOBP04114 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.26
APOBP04114 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC13.46□□□□□ -0.26
APOBP04114 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
APOBP04114 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC13.45□□□□□ -0.26
APOBP04114 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
APOBP04114 AL162412.1-201ENST00000567129 965 ntBASIC13.45□□□□□ -0.26
APOBP04114 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC13.45□□□□□ -0.26
APOBP04114 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC13.45□□□□□ -0.26
APOBP04114 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC13.45□□□□□ -0.26
APOBP04114 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
APOBP04114 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC13.45□□□□□ -0.26
APOBP04114 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC13.45□□□□□ -0.26
APOBP04114 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
APOBP04114 PPOX-219ENST00000544598 813 ntTSL 2 BASIC13.45□□□□□ -0.26
APOBP04114 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
APOBP04114 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
APOBP04114 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
APOBP04114 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
APOBP04114 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
APOBP04114 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC13.45□□□□□ -0.26
APOBP04114 ABHD17AP6-201ENST00000458502 1044 ntBASIC13.45□□□□□ -0.26
APOBP04114 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
APOBP04114 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC13.45□□□□□ -0.26
APOBP04114 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC13.45□□□□□ -0.26
APOBP04114 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC13.44□□□□□ -0.26
APOBP04114 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC13.44□□□□□ -0.26
APOBP04114 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC13.44□□□□□ -0.26
APOBP04114 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
APOBP04114 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
APOBP04114 CYP2T3P-201ENST00000601990 817 ntBASIC13.44□□□□□ -0.26
APOBP04114 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC13.44□□□□□ -0.26
APOBP04114 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
APOBP04114 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
APOBP04114 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
APOBP04114 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC13.44□□□□□ -0.26
APOBP04114 RPPH1-201ENST00000516869 333 ntBASIC13.44□□□□□ -0.26
APOBP04114 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
APOBP04114 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
APOBP04114 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
APOBP04114 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
APOBP04114 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC13.44□□□□□ -0.26
APOBP04114 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
APOBP04114 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
APOBP04114 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC13.44□□□□□ -0.26
APOBP04114 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
APOBP04114 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
APOBP04114 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC13.44□□□□□ -0.26
APOBP04114 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
APOBP04114 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
APOBP04114 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC13.43□□□□□ -0.26
APOBP04114 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC13.43□□□□□ -0.26
APOBP04114 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC13.43□□□□□ -0.26
APOBP04114 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC13.43□□□□□ -0.26
APOBP04114 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms