Protein–RNA interactions for Protein: O96005

CLPTM1, Cleft lip and palate transmembrane protein 1, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1O96005 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
CLPTM1O96005 OR2A1-AS1-204ENST00000470435 602 ntBASIC19.97■□□□□ 0.79
CLPTM1O96005 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC19.97■□□□□ 0.79
CLPTM1O96005 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC19.97■□□□□ 0.79
CLPTM1O96005 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CLPTM1O96005 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC19.97■□□□□ 0.79
CLPTM1O96005 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
CLPTM1O96005 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CLPTM1O96005 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CLPTM1O96005 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
CLPTM1O96005 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CLPTM1O96005 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
CLPTM1O96005 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CLPTM1O96005 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CLPTM1O96005 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
CLPTM1O96005 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CLPTM1O96005 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CLPTM1O96005 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC19.96■□□□□ 0.79
CLPTM1O96005 HES6-204ENST00000409182 863 ntTSL 2 BASIC19.96■□□□□ 0.79
CLPTM1O96005 Z92544.1-202ENST00000571933 1220 ntBASIC19.96■□□□□ 0.79
CLPTM1O96005 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CLPTM1O96005 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CLPTM1O96005 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CLPTM1O96005 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CLPTM1O96005 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
CLPTM1O96005 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC19.96■□□□□ 0.79
CLPTM1O96005 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
CLPTM1O96005 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CLPTM1O96005 AF131216.4-201ENST00000638924 1588 ntBASIC19.95■□□□□ 0.78
CLPTM1O96005 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC19.95■□□□□ 0.78
CLPTM1O96005 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC19.95■□□□□ 0.78
CLPTM1O96005 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
CLPTM1O96005 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CLPTM1O96005 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CLPTM1O96005 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC19.95■□□□□ 0.78
CLPTM1O96005 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CLPTM1O96005 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CLPTM1O96005 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CLPTM1O96005 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC19.95■□□□□ 0.78
CLPTM1O96005 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
CLPTM1O96005 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
CLPTM1O96005 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CLPTM1O96005 AC144652.1-201ENST00000609974 1624 ntBASIC19.94■□□□□ 0.78
CLPTM1O96005 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CLPTM1O96005 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC19.94■□□□□ 0.78
CLPTM1O96005 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CLPTM1O96005 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CLPTM1O96005 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CLPTM1O96005 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CLPTM1O96005 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC19.94■□□□□ 0.78
CLPTM1O96005 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
CLPTM1O96005 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC19.94■□□□□ 0.78
CLPTM1O96005 KRT125P-201ENST00000546827 989 ntBASIC19.94■□□□□ 0.78
CLPTM1O96005 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CLPTM1O96005 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
CLPTM1O96005 AFG3L1P-217ENST00000557444 2447 ntBASIC19.94■□□□□ 0.78
CLPTM1O96005 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
CLPTM1O96005 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
CLPTM1O96005 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CLPTM1O96005 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CLPTM1O96005 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CLPTM1O96005 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CLPTM1O96005 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
CLPTM1O96005 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CLPTM1O96005 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CLPTM1O96005 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CLPTM1O96005 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC19.93■□□□□ 0.78
CLPTM1O96005 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC19.93■□□□□ 0.78
CLPTM1O96005 MIR4787-201ENST00000607364 84 ntBASIC19.93■□□□□ 0.78
CLPTM1O96005 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
CLPTM1O96005 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC19.93■□□□□ 0.78
CLPTM1O96005 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
CLPTM1O96005 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CLPTM1O96005 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CLPTM1O96005 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CLPTM1O96005 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC19.93■□□□□ 0.78
CLPTM1O96005 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CLPTM1O96005 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CLPTM1O96005 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CLPTM1O96005 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
CLPTM1O96005 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
CLPTM1O96005 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC19.92■□□□□ 0.78
CLPTM1O96005 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC19.92■□□□□ 0.78
CLPTM1O96005 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CLPTM1O96005 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CLPTM1O96005 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC19.92■□□□□ 0.78
CLPTM1O96005 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC19.92■□□□□ 0.78
CLPTM1O96005 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CLPTM1O96005 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC19.92■□□□□ 0.78
CLPTM1O96005 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CLPTM1O96005 AC021242.3-201ENST00000607598 1377 ntBASIC19.92■□□□□ 0.78
CLPTM1O96005 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CLPTM1O96005 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CLPTM1O96005 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
CLPTM1O96005 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC19.91■□□□□ 0.78
CLPTM1O96005 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC19.91■□□□□ 0.78
CLPTM1O96005 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC19.91■□□□□ 0.78
CLPTM1O96005 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CLPTM1O96005 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CLPTM1O96005 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 16.8 ms