Protein–RNA interactions for Protein: O95602

POLR1A, DNA-directed RNA polymerase I subunit RPA1, humanhuman

Predicted RBP Predictions only

Length 1,720 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1AO95602 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC31.18■■■□□ 2.58
POLR1AO95602 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC31.18■■■□□ 2.58
POLR1AO95602 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC31.18■■■□□ 2.58
POLR1AO95602 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
POLR1AO95602 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC31.18■■■□□ 2.58
POLR1AO95602 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC31.18■■■□□ 2.58
POLR1AO95602 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
POLR1AO95602 AC093787.1-201ENST00000450396 207 ntBASIC31.18■■■□□ 2.58
POLR1AO95602 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC31.18■■■□□ 2.58
POLR1AO95602 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC31.18■■■□□ 2.58
POLR1AO95602 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
POLR1AO95602 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC31.18■■■□□ 2.58
POLR1AO95602 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC31.17■■■□□ 2.58
POLR1AO95602 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC31.17■■■□□ 2.58
POLR1AO95602 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC31.17■■■□□ 2.58
POLR1AO95602 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC31.17■■■□□ 2.58
POLR1AO95602 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC31.17■■■□□ 2.58
POLR1AO95602 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC31.17■■■□□ 2.58
POLR1AO95602 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
POLR1AO95602 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC31.17■■■□□ 2.58
POLR1AO95602 RHOD-202ENST00000532559 538 ntTSL 3 BASIC31.17■■■□□ 2.58
POLR1AO95602 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC31.17■■■□□ 2.58
POLR1AO95602 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC31.17■■■□□ 2.58
POLR1AO95602 LTK-203ENST00000453182 2412 ntTSL 2 BASIC31.17■■■□□ 2.58
POLR1AO95602 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
POLR1AO95602 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC31.16■■■□□ 2.58
POLR1AO95602 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
POLR1AO95602 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC31.16■■■□□ 2.58
POLR1AO95602 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC31.16■■■□□ 2.58
POLR1AO95602 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC31.15■■■□□ 2.58
POLR1AO95602 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC31.15■■■□□ 2.58
POLR1AO95602 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC31.15■■■□□ 2.58
POLR1AO95602 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
POLR1AO95602 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC31.15■■■□□ 2.58
POLR1AO95602 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
POLR1AO95602 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC31.15■■■□□ 2.58
POLR1AO95602 BX276092.2-201ENST00000417668 665 ntBASIC31.15■■■□□ 2.58
POLR1AO95602 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC31.15■■■□□ 2.58
POLR1AO95602 INO80E-214ENST00000620599 515 ntTSL 2 BASIC31.15■■■□□ 2.58
POLR1AO95602 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC31.15■■■□□ 2.58
POLR1AO95602 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC31.14■■■□□ 2.58
POLR1AO95602 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
POLR1AO95602 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
POLR1AO95602 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC31.14■■■□□ 2.58
POLR1AO95602 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC31.14■■■□□ 2.58
POLR1AO95602 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC31.14■■■□□ 2.58
POLR1AO95602 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC31.14■■■□□ 2.58
POLR1AO95602 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC31.14■■■□□ 2.57
POLR1AO95602 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC31.13■■■□□ 2.57
POLR1AO95602 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC31.13■■■□□ 2.57
POLR1AO95602 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC31.13■■■□□ 2.57
POLR1AO95602 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC31.13■■■□□ 2.57
POLR1AO95602 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
POLR1AO95602 OXCT2P1-201ENST00000447263 1535 ntBASIC31.13■■■□□ 2.57
POLR1AO95602 BMP1-204ENST00000397814 836 ntTSL 4 BASIC31.12■■■□□ 2.57
POLR1AO95602 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC31.12■■■□□ 2.57
POLR1AO95602 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC31.12■■■□□ 2.57
POLR1AO95602 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC31.12■■■□□ 2.57
POLR1AO95602 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC31.12■■■□□ 2.57
POLR1AO95602 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC31.12■■■□□ 2.57
POLR1AO95602 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC31.12■■■□□ 2.57
POLR1AO95602 PXK-203ENST00000383715 1756 ntTSL 5 BASIC31.12■■■□□ 2.57
POLR1AO95602 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
POLR1AO95602 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC31.12■■■□□ 2.57
POLR1AO95602 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC31.12■■■□□ 2.57
POLR1AO95602 AC128676.1-201ENST00000454392 318 ntBASIC31.12■■■□□ 2.57
POLR1AO95602 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC31.12■■■□□ 2.57
POLR1AO95602 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC31.12■■■□□ 2.57
POLR1AO95602 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC31.12■■■□□ 2.57
POLR1AO95602 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
POLR1AO95602 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
POLR1AO95602 AC008550.1-201ENST00000511500 884 ntBASIC31.11■■■□□ 2.57
POLR1AO95602 BET1L-207ENST00000529614 560 ntTSL 5 BASIC31.11■■■□□ 2.57
POLR1AO95602 CBFB-203ENST00000561924 584 ntTSL 5 BASIC31.11■■■□□ 2.57
POLR1AO95602 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC31.11■■■□□ 2.57
POLR1AO95602 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC31.11■■■□□ 2.57
POLR1AO95602 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC31.11■■■□□ 2.57
POLR1AO95602 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
POLR1AO95602 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC31.1■■■□□ 2.57
POLR1AO95602 PLLP-204ENST00000569059 665 ntTSL 3 BASIC31.1■■■□□ 2.57
POLR1AO95602 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC31.1■■■□□ 2.57
POLR1AO95602 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC31.1■■■□□ 2.57
POLR1AO95602 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC31.1■■■□□ 2.57
POLR1AO95602 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC31.1■■■□□ 2.57
POLR1AO95602 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC31.1■■■□□ 2.57
POLR1AO95602 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC31.1■■■□□ 2.57
POLR1AO95602 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC31.1■■■□□ 2.57
POLR1AO95602 GCA-201ENST00000233612 1694 ntTSL 2 BASIC31.1■■■□□ 2.57
POLR1AO95602 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC31.1■■■□□ 2.57
POLR1AO95602 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC31.1■■■□□ 2.57
POLR1AO95602 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC31.1■■■□□ 2.57
POLR1AO95602 AP003097.1-201ENST00000530657 1135 ntBASIC31.1■■■□□ 2.57
POLR1AO95602 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC31.1■■■□□ 2.57
POLR1AO95602 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC31.09■■■□□ 2.57
POLR1AO95602 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
POLR1AO95602 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
POLR1AO95602 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
POLR1AO95602 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC31.09■■■□□ 2.57
POLR1AO95602 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC31.09■■■□□ 2.57
POLR1AO95602 AC091874.3-201ENST00000512672 1195 ntBASIC31.09■■■□□ 2.57
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms