Protein–RNA interactions for Protein: O94907

DKK1, Dickkopf-related protein 1, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DKK1O94907 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
DKK1O94907 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
DKK1O94907 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
DKK1O94907 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
DKK1O94907 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
DKK1O94907 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
DKK1O94907 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC20.47■□□□□ 0.87
DKK1O94907 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC20.47■□□□□ 0.87
DKK1O94907 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
DKK1O94907 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
DKK1O94907 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC20.47■□□□□ 0.87
DKK1O94907 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
DKK1O94907 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
DKK1O94907 ISCU-212ENST00000547005 795 ntTSL 3 BASIC20.47■□□□□ 0.87
DKK1O94907 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC20.47■□□□□ 0.87
DKK1O94907 AL034346.1-201ENST00000568244 1277 ntBASIC20.47■□□□□ 0.87
DKK1O94907 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC20.47■□□□□ 0.87
DKK1O94907 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC20.47■□□□□ 0.87
DKK1O94907 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
DKK1O94907 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC20.47■□□□□ 0.87
DKK1O94907 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
DKK1O94907 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
DKK1O94907 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
DKK1O94907 AC092068.2-201ENST00000590491 1708 ntBASIC20.47■□□□□ 0.87
DKK1O94907 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
DKK1O94907 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
DKK1O94907 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
DKK1O94907 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC20.46■□□□□ 0.87
DKK1O94907 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC20.46■□□□□ 0.87
DKK1O94907 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC20.46■□□□□ 0.87
DKK1O94907 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
DKK1O94907 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
DKK1O94907 ANOS2P-203ENST00000472227 1816 ntBASIC20.46■□□□□ 0.87
DKK1O94907 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC20.46■□□□□ 0.87
DKK1O94907 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
DKK1O94907 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
DKK1O94907 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
DKK1O94907 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
DKK1O94907 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
DKK1O94907 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
DKK1O94907 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
DKK1O94907 UNC93B4-201ENST00000505679 747 ntBASIC20.46■□□□□ 0.87
DKK1O94907 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC20.46■□□□□ 0.87
DKK1O94907 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC20.46■□□□□ 0.87
DKK1O94907 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC20.46■□□□□ 0.87
DKK1O94907 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC20.46■□□□□ 0.87
DKK1O94907 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
DKK1O94907 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
DKK1O94907 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
DKK1O94907 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
DKK1O94907 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC20.46■□□□□ 0.87
DKK1O94907 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
DKK1O94907 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC20.45■□□□□ 0.86
DKK1O94907 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
DKK1O94907 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC20.45■□□□□ 0.86
DKK1O94907 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC20.45■□□□□ 0.86
DKK1O94907 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC20.45■□□□□ 0.86
DKK1O94907 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC20.45■□□□□ 0.86
DKK1O94907 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC20.45■□□□□ 0.86
DKK1O94907 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
DKK1O94907 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC20.45■□□□□ 0.86
DKK1O94907 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC20.45■□□□□ 0.86
DKK1O94907 AC073648.6-201ENST00000641589 218 ntBASIC20.45■□□□□ 0.86
DKK1O94907 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
DKK1O94907 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC20.45■□□□□ 0.86
DKK1O94907 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC20.45■□□□□ 0.86
DKK1O94907 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
DKK1O94907 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC20.45■□□□□ 0.86
DKK1O94907 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
DKK1O94907 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC20.44■□□□□ 0.86
DKK1O94907 AC008550.1-201ENST00000511500 884 ntBASIC20.44■□□□□ 0.86
DKK1O94907 USP36-216ENST00000589424 970 ntTSL 5 BASIC20.44■□□□□ 0.86
DKK1O94907 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC20.44■□□□□ 0.86
DKK1O94907 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
DKK1O94907 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
DKK1O94907 AP006587.3-201ENST00000525742 1516 ntBASIC20.43■□□□□ 0.86
DKK1O94907 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC20.43■□□□□ 0.86
DKK1O94907 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
DKK1O94907 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
DKK1O94907 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
DKK1O94907 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
DKK1O94907 AL591742.1-201ENST00000604433 565 ntBASIC20.43■□□□□ 0.86
DKK1O94907 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
DKK1O94907 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC20.43■□□□□ 0.86
DKK1O94907 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC20.43■□□□□ 0.86
DKK1O94907 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
DKK1O94907 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
DKK1O94907 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
DKK1O94907 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
DKK1O94907 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
DKK1O94907 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
DKK1O94907 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
DKK1O94907 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
DKK1O94907 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC20.42■□□□□ 0.86
DKK1O94907 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC20.42■□□□□ 0.86
DKK1O94907 AP003097.1-201ENST00000530657 1135 ntBASIC20.42■□□□□ 0.86
DKK1O94907 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC20.42■□□□□ 0.86
DKK1O94907 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
DKK1O94907 RBM17P2-201ENST00000616397 1405 ntBASIC20.42■□□□□ 0.86
DKK1O94907 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms