Protein–RNA interactions for Protein: O94782

USP1, Ubiquitin carboxyl-terminal hydrolase 1, humanhuman

Predictions only

Length 785 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP1O94782 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC21.48■■□□□ 1.03
USP1O94782 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC21.48■■□□□ 1.03
USP1O94782 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC21.48■■□□□ 1.03
USP1O94782 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
USP1O94782 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC21.48■■□□□ 1.03
USP1O94782 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC21.48■■□□□ 1.03
USP1O94782 AC005229.4-201ENST00000610085 2198 ntBASIC21.48■■□□□ 1.03
USP1O94782 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
USP1O94782 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
USP1O94782 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
USP1O94782 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC21.47■■□□□ 1.03
USP1O94782 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC21.47■■□□□ 1.03
USP1O94782 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
USP1O94782 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC21.47■■□□□ 1.03
USP1O94782 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
USP1O94782 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC21.47■■□□□ 1.03
USP1O94782 RALB-208ENST00000631312 311 ntTSL 5 BASIC21.47■■□□□ 1.03
USP1O94782 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
USP1O94782 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
USP1O94782 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
USP1O94782 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
USP1O94782 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC21.46■■□□□ 1.03
USP1O94782 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
USP1O94782 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
USP1O94782 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC21.46■■□□□ 1.03
USP1O94782 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
USP1O94782 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC21.46■■□□□ 1.03
USP1O94782 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
USP1O94782 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC21.46■■□□□ 1.03
USP1O94782 AL139246.5-201ENST00000606645 996 ntBASIC21.46■■□□□ 1.03
USP1O94782 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
USP1O94782 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
USP1O94782 FEM1AP4-201ENST00000443167 1987 ntBASIC21.46■■□□□ 1.03
USP1O94782 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC21.46■■□□□ 1.03
USP1O94782 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC21.46■■□□□ 1.03
USP1O94782 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
USP1O94782 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC21.45■■□□□ 1.03
USP1O94782 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
USP1O94782 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
USP1O94782 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC21.45■■□□□ 1.02
USP1O94782 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
USP1O94782 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
USP1O94782 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.02
USP1O94782 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC21.45■■□□□ 1.02
USP1O94782 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC21.45■■□□□ 1.02
USP1O94782 NALT1-201ENST00000429224 738 ntTSL 5 BASIC21.45■■□□□ 1.02
USP1O94782 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC21.45■■□□□ 1.02
USP1O94782 AC133561.4-201ENST00000566112 224 ntBASIC21.45■■□□□ 1.02
USP1O94782 AL136162.1-201ENST00000607711 1078 ntBASIC21.45■■□□□ 1.02
USP1O94782 AC073130.3-201ENST00000624389 2278 ntBASIC21.45■■□□□ 1.02
USP1O94782 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
USP1O94782 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
USP1O94782 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
USP1O94782 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
USP1O94782 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC21.45■■□□□ 1.02
USP1O94782 AC003102.1-202ENST00000563394 1796 ntBASIC21.44■■□□□ 1.02
USP1O94782 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
USP1O94782 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
USP1O94782 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC21.44■■□□□ 1.02
USP1O94782 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC21.44■■□□□ 1.02
USP1O94782 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC21.44■■□□□ 1.02
USP1O94782 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC21.44■■□□□ 1.02
USP1O94782 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC21.44■■□□□ 1.02
USP1O94782 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
USP1O94782 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
USP1O94782 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC21.43■■□□□ 1.02
USP1O94782 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC21.43■■□□□ 1.02
USP1O94782 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC21.43■■□□□ 1.02
USP1O94782 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
USP1O94782 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
USP1O94782 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
USP1O94782 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
USP1O94782 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC21.43■■□□□ 1.02
USP1O94782 AC024257.2-201ENST00000549699 147 ntBASIC21.43■■□□□ 1.02
USP1O94782 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
USP1O94782 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC21.43■■□□□ 1.02
USP1O94782 AC233992.3-201ENST00000607491 485 ntBASIC21.43■■□□□ 1.02
USP1O94782 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
USP1O94782 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
USP1O94782 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
USP1O94782 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC21.43■■□□□ 1.02
USP1O94782 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC21.43■■□□□ 1.02
USP1O94782 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC21.43■■□□□ 1.02
USP1O94782 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
USP1O94782 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
USP1O94782 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
USP1O94782 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC21.42■■□□□ 1.02
USP1O94782 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
USP1O94782 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
USP1O94782 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC21.42■■□□□ 1.02
USP1O94782 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
USP1O94782 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
USP1O94782 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
USP1O94782 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC21.42■■□□□ 1.02
USP1O94782 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC21.42■■□□□ 1.02
USP1O94782 AC135279.3-201ENST00000610945 1311 ntBASIC21.42■■□□□ 1.02
USP1O94782 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
USP1O94782 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
USP1O94782 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC21.41■■□□□ 1.02
USP1O94782 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC21.41■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 49.1 ms