Protein–RNA interactions for Protein: O75489

NDUFS3, NADH dehydrogenase [ubiquinone] iron-sulfur protein 3, mitochondrial, humanhuman

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS3O75489 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
NDUFS3O75489 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
NDUFS3O75489 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC21.2■□□□□ 0.98
NDUFS3O75489 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
NDUFS3O75489 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
NDUFS3O75489 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
NDUFS3O75489 HYI-206ENST00000372434 1025 ntTSL 5 BASIC21.2■□□□□ 0.98
NDUFS3O75489 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
NDUFS3O75489 MFF-208ENST00000409616 1247 ntTSL 5 BASIC21.2■□□□□ 0.98
NDUFS3O75489 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC21.2■□□□□ 0.98
NDUFS3O75489 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC21.2■□□□□ 0.98
NDUFS3O75489 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
NDUFS3O75489 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
NDUFS3O75489 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC21.2■□□□□ 0.98
NDUFS3O75489 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
NDUFS3O75489 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
NDUFS3O75489 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
NDUFS3O75489 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC21.2■□□□□ 0.98
NDUFS3O75489 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
NDUFS3O75489 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
NDUFS3O75489 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
NDUFS3O75489 AP006587.3-201ENST00000525742 1516 ntBASIC21.19■□□□□ 0.98
NDUFS3O75489 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
NDUFS3O75489 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
NDUFS3O75489 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
NDUFS3O75489 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC21.19■□□□□ 0.98
NDUFS3O75489 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC21.19■□□□□ 0.98
NDUFS3O75489 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
NDUFS3O75489 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC21.19■□□□□ 0.98
NDUFS3O75489 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
NDUFS3O75489 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
NDUFS3O75489 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
NDUFS3O75489 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
NDUFS3O75489 AC009237.3-201ENST00000393279 1427 ntBASIC21.19■□□□□ 0.98
NDUFS3O75489 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
NDUFS3O75489 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC21.19■□□□□ 0.98
NDUFS3O75489 AC007375.3-201ENST00000600936 2314 ntBASIC21.18■□□□□ 0.98
NDUFS3O75489 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC21.18■□□□□ 0.98
NDUFS3O75489 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
NDUFS3O75489 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
NDUFS3O75489 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC21.18■□□□□ 0.98
NDUFS3O75489 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC21.18■□□□□ 0.98
NDUFS3O75489 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
NDUFS3O75489 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
NDUFS3O75489 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
NDUFS3O75489 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC21.18■□□□□ 0.98
NDUFS3O75489 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
NDUFS3O75489 AC003102.1-202ENST00000563394 1796 ntBASIC21.18■□□□□ 0.98
NDUFS3O75489 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC21.17■□□□□ 0.98
NDUFS3O75489 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
NDUFS3O75489 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
NDUFS3O75489 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
NDUFS3O75489 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC21.17■□□□□ 0.98
NDUFS3O75489 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC21.17■□□□□ 0.98
NDUFS3O75489 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC21.17■□□□□ 0.98
NDUFS3O75489 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
NDUFS3O75489 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
NDUFS3O75489 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
NDUFS3O75489 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
NDUFS3O75489 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
NDUFS3O75489 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC21.16■□□□□ 0.98
NDUFS3O75489 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC21.16■□□□□ 0.98
NDUFS3O75489 PXK-203ENST00000383715 1756 ntTSL 5 BASIC21.16■□□□□ 0.98
NDUFS3O75489 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
NDUFS3O75489 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
NDUFS3O75489 BX005040.4-201ENST00000637145 1518 ntBASIC21.16■□□□□ 0.98
NDUFS3O75489 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
NDUFS3O75489 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC21.16■□□□□ 0.98
NDUFS3O75489 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
NDUFS3O75489 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
NDUFS3O75489 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
NDUFS3O75489 MIR638-201ENST00000385237 100 ntBASIC21.16■□□□□ 0.98
NDUFS3O75489 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC21.16■□□□□ 0.98
NDUFS3O75489 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
NDUFS3O75489 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
NDUFS3O75489 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
NDUFS3O75489 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
NDUFS3O75489 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC21.16■□□□□ 0.98
NDUFS3O75489 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC21.16■□□□□ 0.98
NDUFS3O75489 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
NDUFS3O75489 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
NDUFS3O75489 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
NDUFS3O75489 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC21.15■□□□□ 0.98
NDUFS3O75489 MPST-204ENST00000404393 1329 ntTSL 5 BASIC21.15■□□□□ 0.98
NDUFS3O75489 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
NDUFS3O75489 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
NDUFS3O75489 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC21.15■□□□□ 0.98
NDUFS3O75489 STOX2-205ENST00000513034 807 ntTSL 3 BASIC21.15■□□□□ 0.98
NDUFS3O75489 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC21.15■□□□□ 0.98
NDUFS3O75489 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
NDUFS3O75489 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC21.15■□□□□ 0.98
NDUFS3O75489 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC21.15■□□□□ 0.98
NDUFS3O75489 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
NDUFS3O75489 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
NDUFS3O75489 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
NDUFS3O75489 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.98
NDUFS3O75489 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC21.14■□□□□ 0.98
NDUFS3O75489 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
NDUFS3O75489 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC21.14■□□□□ 0.97
NDUFS3O75489 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC21.14■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 15.2 ms