Protein–RNA interactions for Protein: O75346

ZNF253, Zinc finger protein 253, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF253O75346 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
ZNF253O75346 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
ZNF253O75346 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC16.48■□□□□ 0.23
ZNF253O75346 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
ZNF253O75346 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
ZNF253O75346 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
ZNF253O75346 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
ZNF253O75346 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
ZNF253O75346 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
ZNF253O75346 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
ZNF253O75346 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
ZNF253O75346 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC16.48■□□□□ 0.23
ZNF253O75346 MIR4787-201ENST00000607364 84 ntBASIC16.48■□□□□ 0.23
ZNF253O75346 AC010997.5-201ENST00000609182 354 ntBASIC16.48■□□□□ 0.23
ZNF253O75346 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
ZNF253O75346 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
ZNF253O75346 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
ZNF253O75346 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC16.48■□□□□ 0.23
ZNF253O75346 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
ZNF253O75346 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
ZNF253O75346 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
ZNF253O75346 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
ZNF253O75346 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC16.47■□□□□ 0.23
ZNF253O75346 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
ZNF253O75346 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
ZNF253O75346 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
ZNF253O75346 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
ZNF253O75346 AC241377.3-202ENST00000626088 1088 ntBASIC16.47■□□□□ 0.23
ZNF253O75346 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC16.47■□□□□ 0.23
ZNF253O75346 AC241585.3-202ENST00000628937 1088 ntBASIC16.47■□□□□ 0.23
ZNF253O75346 AC245100.8-202ENST00000629247 1058 ntBASIC16.47■□□□□ 0.23
ZNF253O75346 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
ZNF253O75346 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
ZNF253O75346 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
ZNF253O75346 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
ZNF253O75346 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
ZNF253O75346 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
ZNF253O75346 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC16.47■□□□□ 0.23
ZNF253O75346 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
ZNF253O75346 LINC01521-201ENST00000504184 1943 ntBASIC16.47■□□□□ 0.23
ZNF253O75346 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
ZNF253O75346 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC16.46■□□□□ 0.23
ZNF253O75346 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC16.46■□□□□ 0.23
ZNF253O75346 RARG-204ENST00000543726 1779 ntTSL 2 BASIC16.46■□□□□ 0.23
ZNF253O75346 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
ZNF253O75346 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC16.46■□□□□ 0.23
ZNF253O75346 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
ZNF253O75346 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC16.46■□□□□ 0.23
ZNF253O75346 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
ZNF253O75346 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
ZNF253O75346 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
ZNF253O75346 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC16.46■□□□□ 0.23
ZNF253O75346 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
ZNF253O75346 HES6-204ENST00000409182 863 ntTSL 2 BASIC16.46■□□□□ 0.23
ZNF253O75346 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
ZNF253O75346 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
ZNF253O75346 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
ZNF253O75346 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
ZNF253O75346 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
ZNF253O75346 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.22
ZNF253O75346 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
ZNF253O75346 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
ZNF253O75346 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
ZNF253O75346 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC16.45■□□□□ 0.22
ZNF253O75346 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC16.45■□□□□ 0.22
ZNF253O75346 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
ZNF253O75346 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC16.45■□□□□ 0.22
ZNF253O75346 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
ZNF253O75346 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
ZNF253O75346 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC16.45■□□□□ 0.22
ZNF253O75346 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC16.45■□□□□ 0.22
ZNF253O75346 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC16.45■□□□□ 0.22
ZNF253O75346 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC16.45■□□□□ 0.22
ZNF253O75346 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
ZNF253O75346 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
ZNF253O75346 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
ZNF253O75346 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
ZNF253O75346 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
ZNF253O75346 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
ZNF253O75346 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
ZNF253O75346 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
ZNF253O75346 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
ZNF253O75346 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
ZNF253O75346 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC16.44■□□□□ 0.22
ZNF253O75346 TUB-203ENST00000534099 1759 ntTSL 2 BASIC16.44■□□□□ 0.22
ZNF253O75346 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC16.44■□□□□ 0.22
ZNF253O75346 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
ZNF253O75346 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC16.44■□□□□ 0.22
ZNF253O75346 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
ZNF253O75346 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
ZNF253O75346 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
ZNF253O75346 AL031602.1-201ENST00000633169 911 ntBASIC16.44■□□□□ 0.22
ZNF253O75346 AL157384.1-201ENST00000445995 2473 ntBASIC16.44■□□□□ 0.22
ZNF253O75346 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
ZNF253O75346 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC16.44■□□□□ 0.22
ZNF253O75346 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
ZNF253O75346 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
ZNF253O75346 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC16.44■□□□□ 0.22
ZNF253O75346 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
ZNF253O75346 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms