Protein–RNA interactions for Protein: O60810

PRAMEF4, PRAME family member 4, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF4O60810 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
PRAMEF4O60810 MFF-208ENST00000409616 1247 ntTSL 5 BASIC20.52■□□□□ 0.88
PRAMEF4O60810 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
PRAMEF4O60810 AC105265.2-201ENST00000467189 838 ntBASIC20.52■□□□□ 0.88
PRAMEF4O60810 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC20.52■□□□□ 0.88
PRAMEF4O60810 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC20.52■□□□□ 0.88
PRAMEF4O60810 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
PRAMEF4O60810 AC005229.4-201ENST00000610085 2198 ntBASIC20.52■□□□□ 0.88
PRAMEF4O60810 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC20.52■□□□□ 0.87
PRAMEF4O60810 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
PRAMEF4O60810 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC20.51■□□□□ 0.87
PRAMEF4O60810 AC005224.4-201ENST00000583262 1652 ntBASIC20.51■□□□□ 0.87
PRAMEF4O60810 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
PRAMEF4O60810 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
PRAMEF4O60810 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC20.51■□□□□ 0.87
PRAMEF4O60810 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
PRAMEF4O60810 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PRAMEF4O60810 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PRAMEF4O60810 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
PRAMEF4O60810 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
PRAMEF4O60810 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC20.51■□□□□ 0.87
PRAMEF4O60810 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC20.51■□□□□ 0.87
PRAMEF4O60810 AC104564.3-201ENST00000582367 638 ntBASIC20.51■□□□□ 0.87
PRAMEF4O60810 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
PRAMEF4O60810 AF106564.1-201ENST00000607058 2553 ntBASIC20.51■□□□□ 0.87
PRAMEF4O60810 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
PRAMEF4O60810 AC009237.3-201ENST00000393279 1427 ntBASIC20.51■□□□□ 0.87
PRAMEF4O60810 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
PRAMEF4O60810 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
PRAMEF4O60810 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
PRAMEF4O60810 USP48-205ENST00000421625 2818 ntTSL 2 BASIC20.5■□□□□ 0.87
PRAMEF4O60810 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC20.5■□□□□ 0.87
PRAMEF4O60810 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC20.5■□□□□ 0.87
PRAMEF4O60810 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
PRAMEF4O60810 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PRAMEF4O60810 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC20.5■□□□□ 0.87
PRAMEF4O60810 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC20.5■□□□□ 0.87
PRAMEF4O60810 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
PRAMEF4O60810 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
PRAMEF4O60810 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC20.5■□□□□ 0.87
PRAMEF4O60810 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PRAMEF4O60810 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PRAMEF4O60810 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC20.5■□□□□ 0.87
PRAMEF4O60810 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC20.5■□□□□ 0.87
PRAMEF4O60810 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
PRAMEF4O60810 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
PRAMEF4O60810 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
PRAMEF4O60810 TPRG1LP1-201ENST00000598702 760 ntBASIC20.49■□□□□ 0.87
PRAMEF4O60810 MIR6084-201ENST00000622012 110 ntBASIC20.49■□□□□ 0.87
PRAMEF4O60810 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PRAMEF4O60810 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PRAMEF4O60810 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PRAMEF4O60810 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PRAMEF4O60810 FEM1AP4-201ENST00000443167 1987 ntBASIC20.48■□□□□ 0.87
PRAMEF4O60810 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PRAMEF4O60810 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PRAMEF4O60810 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PRAMEF4O60810 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PRAMEF4O60810 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PRAMEF4O60810 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PRAMEF4O60810 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PRAMEF4O60810 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC20.48■□□□□ 0.87
PRAMEF4O60810 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
PRAMEF4O60810 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
PRAMEF4O60810 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC20.48■□□□□ 0.87
PRAMEF4O60810 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC20.48■□□□□ 0.87
PRAMEF4O60810 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC20.48■□□□□ 0.87
PRAMEF4O60810 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC20.48■□□□□ 0.87
PRAMEF4O60810 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
PRAMEF4O60810 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
PRAMEF4O60810 MPST-204ENST00000404393 1329 ntTSL 5 BASIC20.48■□□□□ 0.87
PRAMEF4O60810 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
PRAMEF4O60810 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PRAMEF4O60810 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PRAMEF4O60810 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
PRAMEF4O60810 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC20.47■□□□□ 0.87
PRAMEF4O60810 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
PRAMEF4O60810 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC20.47■□□□□ 0.87
PRAMEF4O60810 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
PRAMEF4O60810 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC20.47■□□□□ 0.87
PRAMEF4O60810 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
PRAMEF4O60810 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
PRAMEF4O60810 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PRAMEF4O60810 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
PRAMEF4O60810 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PRAMEF4O60810 DYM-203ENST00000442713 2147 ntTSL 2 BASIC20.47■□□□□ 0.87
PRAMEF4O60810 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
PRAMEF4O60810 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC20.46■□□□□ 0.87
PRAMEF4O60810 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
PRAMEF4O60810 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
PRAMEF4O60810 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PRAMEF4O60810 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PRAMEF4O60810 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
PRAMEF4O60810 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
PRAMEF4O60810 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PRAMEF4O60810 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
PRAMEF4O60810 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC20.46■□□□□ 0.87
PRAMEF4O60810 AL354811.1-201ENST00000610286 706 ntBASIC20.46■□□□□ 0.87
PRAMEF4O60810 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
PRAMEF4O60810 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC20.46■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 17.2 ms