Protein–RNA interactions for Protein: O60260

PRKN, E3 ubiquitin-protein ligase parkin, humanhuman

Predicted RBP Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKNO60260 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC19.83■□□□□ 0.77
PRKNO60260 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC19.83■□□□□ 0.77
PRKNO60260 AL034346.1-201ENST00000568244 1277 ntBASIC19.83■□□□□ 0.77
PRKNO60260 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC19.83■□□□□ 0.77
PRKNO60260 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC19.83■□□□□ 0.76
PRKNO60260 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC19.83■□□□□ 0.76
PRKNO60260 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC19.82■□□□□ 0.76
PRKNO60260 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
PRKNO60260 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PRKNO60260 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PRKNO60260 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PRKNO60260 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PRKNO60260 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC19.82■□□□□ 0.76
PRKNO60260 GXYLT1P2-201ENST00000433312 1230 ntBASIC19.82■□□□□ 0.76
PRKNO60260 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC19.82■□□□□ 0.76
PRKNO60260 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC19.82■□□□□ 0.76
PRKNO60260 GALNS-213ENST00000569433 723 ntTSL 3 BASIC19.82■□□□□ 0.76
PRKNO60260 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC19.82■□□□□ 0.76
PRKNO60260 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC19.82■□□□□ 0.76
PRKNO60260 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC19.82■□□□□ 0.76
PRKNO60260 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
PRKNO60260 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC19.82■□□□□ 0.76
PRKNO60260 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PRKNO60260 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
PRKNO60260 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PRKNO60260 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC19.82■□□□□ 0.76
PRKNO60260 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PRKNO60260 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
PRKNO60260 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
PRKNO60260 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PRKNO60260 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PRKNO60260 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC19.81■□□□□ 0.76
PRKNO60260 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC19.81■□□□□ 0.76
PRKNO60260 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
PRKNO60260 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
PRKNO60260 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC19.81■□□□□ 0.76
PRKNO60260 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC19.81■□□□□ 0.76
PRKNO60260 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
PRKNO60260 AC092437.1-201ENST00000624794 1048 ntBASIC19.81■□□□□ 0.76
PRKNO60260 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC19.81■□□□□ 0.76
PRKNO60260 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PRKNO60260 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC19.81■□□□□ 0.76
PRKNO60260 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
PRKNO60260 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PRKNO60260 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PRKNO60260 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC19.8■□□□□ 0.76
PRKNO60260 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC19.8■□□□□ 0.76
PRKNO60260 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC19.8■□□□□ 0.76
PRKNO60260 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
PRKNO60260 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC19.8■□□□□ 0.76
PRKNO60260 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
PRKNO60260 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PRKNO60260 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC19.8■□□□□ 0.76
PRKNO60260 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
PRKNO60260 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC19.8■□□□□ 0.76
PRKNO60260 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
PRKNO60260 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
PRKNO60260 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
PRKNO60260 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC19.79■□□□□ 0.76
PRKNO60260 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
PRKNO60260 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC19.79■□□□□ 0.76
PRKNO60260 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC19.79■□□□□ 0.76
PRKNO60260 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PRKNO60260 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
PRKNO60260 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
PRKNO60260 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC19.79■□□□□ 0.76
PRKNO60260 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
PRKNO60260 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PRKNO60260 C11orf96-202ENST00000528572 1834 ntBASIC19.79■□□□□ 0.76
PRKNO60260 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC19.78■□□□□ 0.76
PRKNO60260 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
PRKNO60260 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC19.78■□□□□ 0.76
PRKNO60260 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC19.78■□□□□ 0.76
PRKNO60260 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
PRKNO60260 MFF-207ENST00000409565 1548 ntTSL 2 BASIC19.78■□□□□ 0.76
PRKNO60260 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC19.78■□□□□ 0.76
PRKNO60260 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC19.78■□□□□ 0.76
PRKNO60260 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
PRKNO60260 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC19.78■□□□□ 0.76
PRKNO60260 KRT87P-202ENST00000534226 1464 ntBASIC19.78■□□□□ 0.76
PRKNO60260 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PRKNO60260 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PRKNO60260 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
PRKNO60260 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
PRKNO60260 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
PRKNO60260 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
PRKNO60260 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
PRKNO60260 ME3-201ENST00000323418 1068 ntTSL 5 BASIC19.77■□□□□ 0.76
PRKNO60260 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.76
PRKNO60260 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC19.77■□□□□ 0.76
PRKNO60260 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC19.77■□□□□ 0.76
PRKNO60260 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC19.77■□□□□ 0.76
PRKNO60260 TESC-206ENST00000541210 936 ntTSL 3 BASIC19.77■□□□□ 0.76
PRKNO60260 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC19.77■□□□□ 0.76
PRKNO60260 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC19.77■□□□□ 0.76
PRKNO60260 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC19.77■□□□□ 0.76
PRKNO60260 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
PRKNO60260 LINC00565-201ENST00000562710 2331 ntBASIC19.77■□□□□ 0.76
PRKNO60260 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
PRKNO60260 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC19.77■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms