Protein–RNA interactions for Protein: O43915

VEGFD, Vascular endothelial growth factor D, humanhuman

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFDO43915 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC20.93■□□□□ 0.94
VEGFDO43915 AC092666.2-201ENST00000613287 246 ntBASIC20.93■□□□□ 0.94
VEGFDO43915 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
VEGFDO43915 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
VEGFDO43915 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
VEGFDO43915 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
VEGFDO43915 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC20.92■□□□□ 0.94
VEGFDO43915 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
VEGFDO43915 RNF146-206ENST00000480444 843 ntTSL 2 BASIC20.92■□□□□ 0.94
VEGFDO43915 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC20.92■□□□□ 0.94
VEGFDO43915 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC20.92■□□□□ 0.94
VEGFDO43915 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC20.92■□□□□ 0.94
VEGFDO43915 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC20.92■□□□□ 0.94
VEGFDO43915 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
VEGFDO43915 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC20.92■□□□□ 0.94
VEGFDO43915 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC20.92■□□□□ 0.94
VEGFDO43915 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
VEGFDO43915 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
VEGFDO43915 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
VEGFDO43915 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
VEGFDO43915 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
VEGFDO43915 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
VEGFDO43915 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC20.91■□□□□ 0.94
VEGFDO43915 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
VEGFDO43915 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
VEGFDO43915 AC010141.2-201ENST00000452426 721 ntBASIC20.91■□□□□ 0.94
VEGFDO43915 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
VEGFDO43915 DBI-210ENST00000542275 757 ntTSL 5 BASIC20.91■□□□□ 0.94
VEGFDO43915 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
VEGFDO43915 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC20.91■□□□□ 0.94
VEGFDO43915 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC20.91■□□□□ 0.94
VEGFDO43915 AP001160.3-201ENST00000601484 763 ntBASIC20.91■□□□□ 0.94
VEGFDO43915 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC20.91■□□□□ 0.94
VEGFDO43915 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
VEGFDO43915 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
VEGFDO43915 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
VEGFDO43915 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
VEGFDO43915 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC20.9■□□□□ 0.94
VEGFDO43915 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC20.9■□□□□ 0.94
VEGFDO43915 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
VEGFDO43915 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC20.9■□□□□ 0.94
VEGFDO43915 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC20.9■□□□□ 0.94
VEGFDO43915 AC137761.2-201ENST00000561729 223 ntBASIC20.9■□□□□ 0.94
VEGFDO43915 AC145350.3-201ENST00000569033 163 ntBASIC20.9■□□□□ 0.94
VEGFDO43915 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC20.9■□□□□ 0.94
VEGFDO43915 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
VEGFDO43915 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
VEGFDO43915 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
VEGFDO43915 AC010542.4-201ENST00000563151 1910 ntBASIC20.9■□□□□ 0.94
VEGFDO43915 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
VEGFDO43915 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
VEGFDO43915 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC20.89■□□□□ 0.93
VEGFDO43915 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC20.89■□□□□ 0.93
VEGFDO43915 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
VEGFDO43915 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
VEGFDO43915 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC20.89■□□□□ 0.93
VEGFDO43915 STX7-201ENST00000367937 1090 ntTSL 5 BASIC20.89■□□□□ 0.93
VEGFDO43915 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC20.89■□□□□ 0.93
VEGFDO43915 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC20.89■□□□□ 0.93
VEGFDO43915 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
VEGFDO43915 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
VEGFDO43915 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC20.89■□□□□ 0.93
VEGFDO43915 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
VEGFDO43915 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
VEGFDO43915 GOLGA2P6-201ENST00000340929 2049 ntBASIC20.88■□□□□ 0.93
VEGFDO43915 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
VEGFDO43915 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
VEGFDO43915 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
VEGFDO43915 ME3-201ENST00000323418 1068 ntTSL 5 BASIC20.88■□□□□ 0.93
VEGFDO43915 AC016769.1-201ENST00000409132 1010 ntBASIC20.88■□□□□ 0.93
VEGFDO43915 KRT18P20-201ENST00000548986 1279 ntBASIC20.88■□□□□ 0.93
VEGFDO43915 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC20.88■□□□□ 0.93
VEGFDO43915 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC20.88■□□□□ 0.93
VEGFDO43915 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC20.88■□□□□ 0.93
VEGFDO43915 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
VEGFDO43915 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC20.88■□□□□ 0.93
VEGFDO43915 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
VEGFDO43915 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
VEGFDO43915 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
VEGFDO43915 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC20.87■□□□□ 0.93
VEGFDO43915 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC20.87■□□□□ 0.93
VEGFDO43915 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
VEGFDO43915 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
VEGFDO43915 HSCB-202ENST00000398941 955 ntTSL 2 BASIC20.87■□□□□ 0.93
VEGFDO43915 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
VEGFDO43915 AC006015.1-201ENST00000429970 570 ntBASIC20.87■□□□□ 0.93
VEGFDO43915 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC20.87■□□□□ 0.93
VEGFDO43915 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
VEGFDO43915 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC20.87■□□□□ 0.93
VEGFDO43915 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC20.87■□□□□ 0.93
VEGFDO43915 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
VEGFDO43915 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
VEGFDO43915 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
VEGFDO43915 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
VEGFDO43915 RARG-204ENST00000543726 1779 ntTSL 2 BASIC20.87■□□□□ 0.93
VEGFDO43915 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
VEGFDO43915 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
VEGFDO43915 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
VEGFDO43915 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
VEGFDO43915 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms