Protein–RNA interactions for Protein: O43868

SLC28A2, Sodium/nucleoside cotransporter 2, humanhuman

Predictions only

Length 658 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A2O43868 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC20.45■□□□□ 0.86
SLC28A2O43868 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC20.45■□□□□ 0.86
SLC28A2O43868 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC20.45■□□□□ 0.86
SLC28A2O43868 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SLC28A2O43868 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SLC28A2O43868 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
SLC28A2O43868 MPST-204ENST00000404393 1329 ntTSL 5 BASIC20.45■□□□□ 0.86
SLC28A2O43868 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SLC28A2O43868 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC20.45■□□□□ 0.86
SLC28A2O43868 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
SLC28A2O43868 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC20.45■□□□□ 0.86
SLC28A2O43868 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SLC28A2O43868 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SLC28A2O43868 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SLC28A2O43868 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
SLC28A2O43868 C11orf96-202ENST00000528572 1834 ntBASIC20.44■□□□□ 0.86
SLC28A2O43868 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
SLC28A2O43868 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
SLC28A2O43868 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SLC28A2O43868 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
SLC28A2O43868 FAM201B-201ENST00000458407 597 ntBASIC20.44■□□□□ 0.86
SLC28A2O43868 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
SLC28A2O43868 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC20.44■□□□□ 0.86
SLC28A2O43868 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
SLC28A2O43868 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
SLC28A2O43868 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
SLC28A2O43868 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
SLC28A2O43868 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC20.43■□□□□ 0.86
SLC28A2O43868 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC20.43■□□□□ 0.86
SLC28A2O43868 METTL26-203ENST00000397664 604 ntTSL 2 BASIC20.43■□□□□ 0.86
SLC28A2O43868 KRT18P6-201ENST00000555540 1265 ntBASIC20.43■□□□□ 0.86
SLC28A2O43868 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC20.43■□□□□ 0.86
SLC28A2O43868 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SLC28A2O43868 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SLC28A2O43868 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
SLC28A2O43868 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SLC28A2O43868 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
SLC28A2O43868 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC20.43■□□□□ 0.86
SLC28A2O43868 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC20.42■□□□□ 0.86
SLC28A2O43868 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC20.42■□□□□ 0.86
SLC28A2O43868 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SLC28A2O43868 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SLC28A2O43868 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SLC28A2O43868 LHPP-203ENST00000392757 840 ntTSL 3 BASIC20.42■□□□□ 0.86
SLC28A2O43868 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC20.42■□□□□ 0.86
SLC28A2O43868 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC20.42■□□□□ 0.86
SLC28A2O43868 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC20.42■□□□□ 0.86
SLC28A2O43868 KRT18P61-201ENST00000585825 1298 ntBASIC20.42■□□□□ 0.86
SLC28A2O43868 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SLC28A2O43868 WWC2-AS2-201ENST00000578387 2183 ntBASIC20.42■□□□□ 0.86
SLC28A2O43868 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC20.42■□□□□ 0.86
SLC28A2O43868 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SLC28A2O43868 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC20.42■□□□□ 0.86
SLC28A2O43868 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC20.42■□□□□ 0.86
SLC28A2O43868 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SLC28A2O43868 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SLC28A2O43868 AC137767.1-201ENST00000602918 1920 ntBASIC20.41■□□□□ 0.86
SLC28A2O43868 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SLC28A2O43868 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SLC28A2O43868 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC20.41■□□□□ 0.86
SLC28A2O43868 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
SLC28A2O43868 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC20.41■□□□□ 0.86
SLC28A2O43868 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC20.41■□□□□ 0.86
SLC28A2O43868 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC20.41■□□□□ 0.86
SLC28A2O43868 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
SLC28A2O43868 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SLC28A2O43868 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC20.41■□□□□ 0.86
SLC28A2O43868 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
SLC28A2O43868 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
SLC28A2O43868 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SLC28A2O43868 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
SLC28A2O43868 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC20.41■□□□□ 0.86
SLC28A2O43868 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SLC28A2O43868 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SLC28A2O43868 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SLC28A2O43868 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SLC28A2O43868 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SLC28A2O43868 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SLC28A2O43868 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC20.4■□□□□ 0.86
SLC28A2O43868 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC20.4■□□□□ 0.86
SLC28A2O43868 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SLC28A2O43868 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
SLC28A2O43868 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SLC28A2O43868 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC20.4■□□□□ 0.86
SLC28A2O43868 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
SLC28A2O43868 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
SLC28A2O43868 GTSE1-AS1-202ENST00000623117 1518 ntBASIC20.39■□□□□ 0.85
SLC28A2O43868 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC20.39■□□□□ 0.85
SLC28A2O43868 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
SLC28A2O43868 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC20.39■□□□□ 0.85
SLC28A2O43868 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC20.39■□□□□ 0.85
SLC28A2O43868 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SLC28A2O43868 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
SLC28A2O43868 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SLC28A2O43868 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
SLC28A2O43868 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
SLC28A2O43868 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
SLC28A2O43868 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC20.39■□□□□ 0.85
SLC28A2O43868 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC20.39■□□□□ 0.85
SLC28A2O43868 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 13.9 ms