Protein–RNA interactions for Protein: O43325

LYRM1, LYR motif-containing protein 1, humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYRM1O43325 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
LYRM1O43325 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC18.29■□□□□ 0.52
LYRM1O43325 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
LYRM1O43325 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC18.29■□□□□ 0.52
LYRM1O43325 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LYRM1O43325 AC009086.3-201ENST00000623486 1008 ntBASIC18.29■□□□□ 0.52
LYRM1O43325 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC18.29■□□□□ 0.52
LYRM1O43325 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
LYRM1O43325 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
LYRM1O43325 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LYRM1O43325 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC18.29■□□□□ 0.52
LYRM1O43325 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC18.29■□□□□ 0.52
LYRM1O43325 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
LYRM1O43325 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
LYRM1O43325 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
LYRM1O43325 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
LYRM1O43325 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
LYRM1O43325 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
LYRM1O43325 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
LYRM1O43325 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC18.28■□□□□ 0.52
LYRM1O43325 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC18.28■□□□□ 0.52
LYRM1O43325 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
LYRM1O43325 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
LYRM1O43325 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
LYRM1O43325 MLEC-202ENST00000412616 841 ntTSL 3 BASIC18.28■□□□□ 0.52
LYRM1O43325 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
LYRM1O43325 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
LYRM1O43325 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
LYRM1O43325 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
LYRM1O43325 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
LYRM1O43325 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
LYRM1O43325 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
LYRM1O43325 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
LYRM1O43325 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
LYRM1O43325 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
LYRM1O43325 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC18.28■□□□□ 0.52
LYRM1O43325 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC18.28■□□□□ 0.52
LYRM1O43325 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC18.28■□□□□ 0.52
LYRM1O43325 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
LYRM1O43325 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.52
LYRM1O43325 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC18.27■□□□□ 0.52
LYRM1O43325 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.52
LYRM1O43325 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
LYRM1O43325 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
LYRM1O43325 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
LYRM1O43325 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC18.27■□□□□ 0.52
LYRM1O43325 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
LYRM1O43325 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
LYRM1O43325 TPT1-202ENST00000379055 948 ntTSL 2 BASIC18.27■□□□□ 0.52
LYRM1O43325 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
LYRM1O43325 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
LYRM1O43325 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
LYRM1O43325 C17orf82-201ENST00000623772 1530 ntBASIC18.27■□□□□ 0.51
LYRM1O43325 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC18.27■□□□□ 0.51
LYRM1O43325 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.51
LYRM1O43325 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.51
LYRM1O43325 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC18.27■□□□□ 0.51
LYRM1O43325 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
LYRM1O43325 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC18.27■□□□□ 0.51
LYRM1O43325 AC026471.6-201ENST00000622954 1905 ntBASIC18.27■□□□□ 0.51
LYRM1O43325 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
LYRM1O43325 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.51
LYRM1O43325 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
LYRM1O43325 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
LYRM1O43325 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.51
LYRM1O43325 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC18.27■□□□□ 0.51
LYRM1O43325 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC18.26■□□□□ 0.51
LYRM1O43325 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC18.26■□□□□ 0.51
LYRM1O43325 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
LYRM1O43325 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC18.26■□□□□ 0.51
LYRM1O43325 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
LYRM1O43325 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
LYRM1O43325 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
LYRM1O43325 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
LYRM1O43325 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
LYRM1O43325 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC18.26■□□□□ 0.51
LYRM1O43325 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
LYRM1O43325 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC18.26■□□□□ 0.51
LYRM1O43325 GAK-223ENST00000628912 497 ntTSL 5 BASIC18.26■□□□□ 0.51
LYRM1O43325 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
LYRM1O43325 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
LYRM1O43325 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
LYRM1O43325 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
LYRM1O43325 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
LYRM1O43325 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
LYRM1O43325 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
LYRM1O43325 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
LYRM1O43325 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
LYRM1O43325 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
LYRM1O43325 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
LYRM1O43325 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
LYRM1O43325 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
LYRM1O43325 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
LYRM1O43325 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
LYRM1O43325 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
LYRM1O43325 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
LYRM1O43325 BID-204ENST00000399767 2129 ntTSL 2 BASIC18.25■□□□□ 0.51
LYRM1O43325 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
LYRM1O43325 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
LYRM1O43325 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms