Protein–RNA interactions for Protein: O00716

E2F3, Transcription factor E2F3, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
E2F3O00716 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
E2F3O00716 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
E2F3O00716 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
E2F3O00716 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC20.74■□□□□ 0.91
E2F3O00716 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
E2F3O00716 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
E2F3O00716 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
E2F3O00716 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
E2F3O00716 AF106564.1-201ENST00000607058 2553 ntBASIC20.74■□□□□ 0.91
E2F3O00716 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
E2F3O00716 PARL-206ENST00000435888 1098 ntTSL 5 BASIC20.74■□□□□ 0.91
E2F3O00716 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC20.74■□□□□ 0.91
E2F3O00716 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
E2F3O00716 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
E2F3O00716 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
E2F3O00716 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
E2F3O00716 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC20.74■□□□□ 0.91
E2F3O00716 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
E2F3O00716 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC20.73■□□□□ 0.91
E2F3O00716 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
E2F3O00716 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC20.73■□□□□ 0.91
E2F3O00716 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
E2F3O00716 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC20.73■□□□□ 0.91
E2F3O00716 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC20.73■□□□□ 0.91
E2F3O00716 SMUG1P1-201ENST00000590640 811 ntBASIC20.73■□□□□ 0.91
E2F3O00716 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC20.73■□□□□ 0.91
E2F3O00716 AC087623.3-201ENST00000607047 1098 ntBASIC20.73■□□□□ 0.91
E2F3O00716 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
E2F3O00716 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
E2F3O00716 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
E2F3O00716 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
E2F3O00716 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
E2F3O00716 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
E2F3O00716 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC20.73■□□□□ 0.91
E2F3O00716 RASA4CP-201ENST00000424092 1398 ntBASIC20.72■□□□□ 0.91
E2F3O00716 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC20.72■□□□□ 0.91
E2F3O00716 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
E2F3O00716 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
E2F3O00716 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
E2F3O00716 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
E2F3O00716 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC20.72■□□□□ 0.91
E2F3O00716 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC20.72■□□□□ 0.91
E2F3O00716 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC20.72■□□□□ 0.91
E2F3O00716 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
E2F3O00716 AP006587.3-201ENST00000525742 1516 ntBASIC20.72■□□□□ 0.91
E2F3O00716 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
E2F3O00716 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
E2F3O00716 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
E2F3O00716 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC20.71■□□□□ 0.91
E2F3O00716 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
E2F3O00716 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC20.71■□□□□ 0.91
E2F3O00716 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
E2F3O00716 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC20.71■□□□□ 0.91
E2F3O00716 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC20.71■□□□□ 0.91
E2F3O00716 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC20.71■□□□□ 0.91
E2F3O00716 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
E2F3O00716 PLD4-205ENST00000553861 667 ntTSL 2 BASIC20.71■□□□□ 0.91
E2F3O00716 AC027682.1-201ENST00000562846 899 ntBASIC20.71■□□□□ 0.91
E2F3O00716 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
E2F3O00716 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
E2F3O00716 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
E2F3O00716 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
E2F3O00716 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
E2F3O00716 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
E2F3O00716 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC20.7■□□□□ 0.9
E2F3O00716 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
E2F3O00716 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC20.7■□□□□ 0.9
E2F3O00716 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC20.7■□□□□ 0.9
E2F3O00716 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
E2F3O00716 AL162430.1-201ENST00000480705 870 ntBASIC20.7■□□□□ 0.9
E2F3O00716 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC20.7■□□□□ 0.9
E2F3O00716 IGHV3-19-201ENST00000521488 291 ntBASIC20.7■□□□□ 0.9
E2F3O00716 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC20.7■□□□□ 0.9
E2F3O00716 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
E2F3O00716 AC126544.1-201ENST00000580842 1059 ntBASIC20.7■□□□□ 0.9
E2F3O00716 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
E2F3O00716 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC20.7■□□□□ 0.9
E2F3O00716 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
E2F3O00716 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
E2F3O00716 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
E2F3O00716 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC20.69■□□□□ 0.9
E2F3O00716 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
E2F3O00716 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC20.69■□□□□ 0.9
E2F3O00716 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
E2F3O00716 AL024507.2-201ENST00000606070 2574 ntBASIC20.69■□□□□ 0.9
E2F3O00716 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC20.69■□□□□ 0.9
E2F3O00716 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
E2F3O00716 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
E2F3O00716 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
E2F3O00716 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
E2F3O00716 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
E2F3O00716 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
E2F3O00716 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
E2F3O00716 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
E2F3O00716 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
E2F3O00716 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC20.68■□□□□ 0.9
E2F3O00716 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC20.68■□□□□ 0.9
E2F3O00716 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
E2F3O00716 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
E2F3O00716 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms