Protein–RNA interactions for Protein: H3BM21

Integrin beta (Fragment), humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3BM21 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
H3BM21 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
H3BM21 AC006970.2-201ENST00000450065 779 ntBASIC21.17■□□□□ 0.98
H3BM21 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC21.17■□□□□ 0.98
H3BM21 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
H3BM21 RAP2CP1-201ENST00000605103 478 ntBASIC21.17■□□□□ 0.98
H3BM21 AC104187.1-201ENST00000607510 612 ntBASIC21.17■□□□□ 0.98
H3BM21 AC011767.1-201ENST00000617410 1153 ntBASIC21.17■□□□□ 0.98
H3BM21 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
H3BM21 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC21.17■□□□□ 0.98
H3BM21 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC21.17■□□□□ 0.98
H3BM21 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
H3BM21 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
H3BM21 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
H3BM21 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
H3BM21 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
H3BM21 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC21.16■□□□□ 0.98
H3BM21 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
H3BM21 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
H3BM21 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
H3BM21 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC21.16■□□□□ 0.98
H3BM21 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
H3BM21 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC21.16■□□□□ 0.98
H3BM21 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC21.16■□□□□ 0.98
H3BM21 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC21.16■□□□□ 0.98
H3BM21 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
H3BM21 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC21.16■□□□□ 0.98
H3BM21 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
H3BM21 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
H3BM21 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
H3BM21 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
H3BM21 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC21.15■□□□□ 0.98
H3BM21 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
H3BM21 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
H3BM21 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
H3BM21 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC21.15■□□□□ 0.98
H3BM21 GXYLT1P5-201ENST00000614548 1189 ntBASIC21.15■□□□□ 0.98
H3BM21 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
H3BM21 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
H3BM21 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
H3BM21 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
H3BM21 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
H3BM21 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC21.15■□□□□ 0.98
H3BM21 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
H3BM21 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
H3BM21 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
H3BM21 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
H3BM21 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC21.14■□□□□ 0.98
H3BM21 MFF-207ENST00000409565 1548 ntTSL 2 BASIC21.14■□□□□ 0.98
H3BM21 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.98
H3BM21 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC21.14■□□□□ 0.98
H3BM21 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
H3BM21 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
H3BM21 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC21.14■□□□□ 0.97
H3BM21 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
H3BM21 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
H3BM21 FXN-202ENST00000396364 980 ntTSL 5 BASIC21.14■□□□□ 0.97
H3BM21 AL034346.1-201ENST00000568244 1277 ntBASIC21.14■□□□□ 0.97
H3BM21 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
H3BM21 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
H3BM21 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC21.14■□□□□ 0.97
H3BM21 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
H3BM21 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
H3BM21 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
H3BM21 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
H3BM21 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
H3BM21 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC21.13■□□□□ 0.97
H3BM21 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC21.13■□□□□ 0.97
H3BM21 ECEL1P1-201ENST00000373592 1742 ntBASIC21.13■□□□□ 0.97
H3BM21 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC21.13■□□□□ 0.97
H3BM21 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC21.13■□□□□ 0.97
H3BM21 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC21.13■□□□□ 0.97
H3BM21 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
H3BM21 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC21.13■□□□□ 0.97
H3BM21 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC21.13■□□□□ 0.97
H3BM21 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC21.13■□□□□ 0.97
H3BM21 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
H3BM21 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
H3BM21 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC21.12■□□□□ 0.97
H3BM21 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
H3BM21 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
H3BM21 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
H3BM21 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC21.12■□□□□ 0.97
H3BM21 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
H3BM21 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
H3BM21 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC21.12■□□□□ 0.97
H3BM21 PPP1R14BP3-201ENST00000509033 445 ntBASIC21.12■□□□□ 0.97
H3BM21 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC21.12■□□□□ 0.97
H3BM21 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC21.12■□□□□ 0.97
H3BM21 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC21.12■□□□□ 0.97
H3BM21 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC21.12■□□□□ 0.97
H3BM21 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC21.12■□□□□ 0.97
H3BM21 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC21.12■□□□□ 0.97
H3BM21 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC21.12■□□□□ 0.97
H3BM21 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
H3BM21 CLDN5-201ENST00000403084 2357 ntBASIC21.12■□□□□ 0.97
H3BM21 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
H3BM21 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC21.12■□□□□ 0.97
H3BM21 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
H3BM21 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms