Protein–RNA interactions for Protein: B4DXG7

cDNA FLJ57652, highly similar to Ephrin-A3, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
B4DXG7 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
B4DXG7 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
B4DXG7 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
B4DXG7 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
B4DXG7 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC19.67■□□□□ 0.74
B4DXG7 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
B4DXG7 NME4-202ENST00000382940 766 ntTSL 3 BASIC19.67■□□□□ 0.74
B4DXG7 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
B4DXG7 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC19.67■□□□□ 0.74
B4DXG7 TPRG1LP1-201ENST00000598702 760 ntBASIC19.67■□□□□ 0.74
B4DXG7 NME4-211ENST00000620944 1193 ntTSL 2 BASIC19.67■□□□□ 0.74
B4DXG7 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
B4DXG7 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
B4DXG7 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
B4DXG7 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
B4DXG7 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC19.67■□□□□ 0.74
B4DXG7 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
B4DXG7 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
B4DXG7 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
B4DXG7 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
B4DXG7 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
B4DXG7 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
B4DXG7 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
B4DXG7 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
B4DXG7 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC19.66■□□□□ 0.74
B4DXG7 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
B4DXG7 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
B4DXG7 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
B4DXG7 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
B4DXG7 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
B4DXG7 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC19.66■□□□□ 0.74
B4DXG7 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC19.66■□□□□ 0.74
B4DXG7 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
B4DXG7 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
B4DXG7 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
B4DXG7 AK1-201ENST00000223836 736 ntTSL 3 BASIC19.65■□□□□ 0.74
B4DXG7 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
B4DXG7 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
B4DXG7 AC087623.3-201ENST00000607047 1098 ntBASIC19.65■□□□□ 0.74
B4DXG7 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
B4DXG7 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
B4DXG7 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC19.65■□□□□ 0.74
B4DXG7 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
B4DXG7 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
B4DXG7 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
B4DXG7 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
B4DXG7 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
B4DXG7 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
B4DXG7 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
B4DXG7 NT5C3AP1-201ENST00000394500 1012 ntBASIC19.64■□□□□ 0.73
B4DXG7 AC097381.1-201ENST00000429019 1296 ntBASIC19.64■□□□□ 0.73
B4DXG7 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC19.64■□□□□ 0.73
B4DXG7 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
B4DXG7 MPST-204ENST00000404393 1329 ntTSL 5 BASIC19.64■□□□□ 0.73
B4DXG7 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
B4DXG7 OR7E47P-201ENST00000546390 1422 ntBASIC19.64■□□□□ 0.73
B4DXG7 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
B4DXG7 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
B4DXG7 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC19.64■□□□□ 0.73
B4DXG7 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC19.64■□□□□ 0.73
B4DXG7 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
B4DXG7 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC19.63■□□□□ 0.73
B4DXG7 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC19.63■□□□□ 0.73
B4DXG7 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
B4DXG7 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
B4DXG7 BX005040.4-201ENST00000637145 1518 ntBASIC19.63■□□□□ 0.73
B4DXG7 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
B4DXG7 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
B4DXG7 MFF-208ENST00000409616 1247 ntTSL 5 BASIC19.63■□□□□ 0.73
B4DXG7 YBX1P1-201ENST00000445822 960 ntBASIC19.63■□□□□ 0.73
B4DXG7 MIR6821-201ENST00000617625 74 ntBASIC19.63■□□□□ 0.73
B4DXG7 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
B4DXG7 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
B4DXG7 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
B4DXG7 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC19.63■□□□□ 0.73
B4DXG7 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
B4DXG7 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
B4DXG7 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
B4DXG7 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
B4DXG7 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC19.62■□□□□ 0.73
B4DXG7 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
B4DXG7 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
B4DXG7 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC19.62■□□□□ 0.73
B4DXG7 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
B4DXG7 HACD1-201ENST00000326961 773 ntTSL 2 BASIC19.62■□□□□ 0.73
B4DXG7 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
B4DXG7 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
B4DXG7 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
B4DXG7 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
B4DXG7 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
B4DXG7 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
B4DXG7 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC19.62■□□□□ 0.73
B4DXG7 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
B4DXG7 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
B4DXG7 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC19.62■□□□□ 0.73
B4DXG7 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC19.62■□□□□ 0.73
B4DXG7 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
B4DXG7 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
B4DXG7 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
B4DXG7 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms