Protein–RNA interactions for Protein: A6NE82

MBD3L3, Putative methyl-CpG-binding domain protein 3-like 3, humanhuman

Predicted RBP Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L3A6NE82 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
MBD3L3A6NE82 METTL15-202ENST00000403099 795 ntTSL 5 BASIC18.8■□□□□ 0.6
MBD3L3A6NE82 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC18.8■□□□□ 0.6
MBD3L3A6NE82 UQCRFS1P1-201ENST00000435169 820 ntBASIC18.8■□□□□ 0.6
MBD3L3A6NE82 TSPY6P-201ENST00000448518 926 ntBASIC18.8■□□□□ 0.6
MBD3L3A6NE82 AC007322.4-201ENST00000509611 723 ntBASIC18.8■□□□□ 0.6
MBD3L3A6NE82 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
MBD3L3A6NE82 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
MBD3L3A6NE82 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
MBD3L3A6NE82 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
MBD3L3A6NE82 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
MBD3L3A6NE82 LTK-203ENST00000453182 2412 ntTSL 2 BASIC18.8■□□□□ 0.6
MBD3L3A6NE82 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
MBD3L3A6NE82 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC18.8■□□□□ 0.6
MBD3L3A6NE82 PKM-204ENST00000449901 2526 ntTSL 2 BASIC18.79■□□□□ 0.6
MBD3L3A6NE82 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC18.79■□□□□ 0.6
MBD3L3A6NE82 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC18.79■□□□□ 0.6
MBD3L3A6NE82 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
MBD3L3A6NE82 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC18.79■□□□□ 0.6
MBD3L3A6NE82 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
MBD3L3A6NE82 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC18.79■□□□□ 0.6
MBD3L3A6NE82 APTR-203ENST00000430801 583 ntTSL 5 BASIC18.79■□□□□ 0.6
MBD3L3A6NE82 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC18.79■□□□□ 0.6
MBD3L3A6NE82 AC142086.2-201ENST00000569753 217 ntBASIC18.79■□□□□ 0.6
MBD3L3A6NE82 AC133552.2-202ENST00000575694 574 ntBASIC18.79■□□□□ 0.6
MBD3L3A6NE82 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
MBD3L3A6NE82 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC18.79■□□□□ 0.6
MBD3L3A6NE82 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC18.79■□□□□ 0.6
MBD3L3A6NE82 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
MBD3L3A6NE82 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC18.79■□□□□ 0.6
MBD3L3A6NE82 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
MBD3L3A6NE82 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
MBD3L3A6NE82 C1orf229-201ENST00000623686 2258 ntBASIC18.79■□□□□ 0.6
MBD3L3A6NE82 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
MBD3L3A6NE82 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
MBD3L3A6NE82 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC18.78■□□□□ 0.6
MBD3L3A6NE82 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
MBD3L3A6NE82 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
MBD3L3A6NE82 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
MBD3L3A6NE82 KRT16P2-201ENST00000414673 1423 ntBASIC18.78■□□□□ 0.6
MBD3L3A6NE82 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
MBD3L3A6NE82 GUSBP6-202ENST00000438529 1198 ntBASIC18.78■□□□□ 0.6
MBD3L3A6NE82 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC18.78■□□□□ 0.6
MBD3L3A6NE82 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC18.78■□□□□ 0.6
MBD3L3A6NE82 GAMT-205ENST00000640762 751 ntTSL 5 BASIC18.78■□□□□ 0.6
MBD3L3A6NE82 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
MBD3L3A6NE82 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
MBD3L3A6NE82 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
MBD3L3A6NE82 AC003102.1-202ENST00000563394 1796 ntBASIC18.78■□□□□ 0.6
MBD3L3A6NE82 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC18.78■□□□□ 0.6
MBD3L3A6NE82 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
MBD3L3A6NE82 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC18.77■□□□□ 0.6
MBD3L3A6NE82 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
MBD3L3A6NE82 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
MBD3L3A6NE82 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
MBD3L3A6NE82 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
MBD3L3A6NE82 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
MBD3L3A6NE82 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC18.77■□□□□ 0.6
MBD3L3A6NE82 BMP1-204ENST00000397814 836 ntTSL 4 BASIC18.77■□□□□ 0.6
MBD3L3A6NE82 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC18.77■□□□□ 0.6
MBD3L3A6NE82 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC18.77■□□□□ 0.6
MBD3L3A6NE82 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC18.77■□□□□ 0.6
MBD3L3A6NE82 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC18.77■□□□□ 0.6
MBD3L3A6NE82 RARG-204ENST00000543726 1779 ntTSL 2 BASIC18.77■□□□□ 0.6
MBD3L3A6NE82 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
MBD3L3A6NE82 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
MBD3L3A6NE82 AC080038.3-201ENST00000623346 1952 ntBASIC18.77■□□□□ 0.59
MBD3L3A6NE82 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.59
MBD3L3A6NE82 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
MBD3L3A6NE82 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
MBD3L3A6NE82 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
MBD3L3A6NE82 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
MBD3L3A6NE82 AF201337.1-201ENST00000520239 748 ntBASIC18.76■□□□□ 0.59
MBD3L3A6NE82 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
MBD3L3A6NE82 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
MBD3L3A6NE82 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC18.76■□□□□ 0.59
MBD3L3A6NE82 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
MBD3L3A6NE82 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC18.76■□□□□ 0.59
MBD3L3A6NE82 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
MBD3L3A6NE82 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
MBD3L3A6NE82 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
MBD3L3A6NE82 AC068338.2-201ENST00000563278 1430 ntBASIC18.75■□□□□ 0.59
MBD3L3A6NE82 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
MBD3L3A6NE82 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
MBD3L3A6NE82 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
MBD3L3A6NE82 SLC29A4P1-201ENST00000398760 971 ntBASIC18.75■□□□□ 0.59
MBD3L3A6NE82 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC18.75■□□□□ 0.59
MBD3L3A6NE82 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
MBD3L3A6NE82 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
MBD3L3A6NE82 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC18.75■□□□□ 0.59
MBD3L3A6NE82 CASK-201ENST00000378154 2494 ntTSL 5 BASIC18.75■□□□□ 0.59
MBD3L3A6NE82 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
MBD3L3A6NE82 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
MBD3L3A6NE82 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
MBD3L3A6NE82 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
MBD3L3A6NE82 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
MBD3L3A6NE82 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC18.74■□□□□ 0.59
MBD3L3A6NE82 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
MBD3L3A6NE82 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
MBD3L3A6NE82 BET1L-204ENST00000410108 637 ntTSL 3 BASIC18.74■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 17.7 ms