Protein–RNA interactions for Protein: A0A0B4J249

TRAV5, T-cell receptor alpha variable 5 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV5A0A0B4J249 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TRAV5A0A0B4J249 AC006455.2-201ENST00000429931 906 ntBASIC16.5■□□□□ 0.23
TRAV5A0A0B4J249 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC16.5■□□□□ 0.23
TRAV5A0A0B4J249 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TRAV5A0A0B4J249 pRNA.6-201ENST00000610482 90 ntBASIC16.5■□□□□ 0.23
TRAV5A0A0B4J249 pRNA.5-201ENST00000612139 90 ntBASIC16.5■□□□□ 0.23
TRAV5A0A0B4J249 pRNA.11-201ENST00000618423 90 ntBASIC16.5■□□□□ 0.23
TRAV5A0A0B4J249 pRNA.13-201ENST00000619112 90 ntBASIC16.5■□□□□ 0.23
TRAV5A0A0B4J249 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC16.5■□□□□ 0.23
TRAV5A0A0B4J249 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC16.5■□□□□ 0.23
TRAV5A0A0B4J249 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRAV5A0A0B4J249 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC16.5■□□□□ 0.23
TRAV5A0A0B4J249 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRAV5A0A0B4J249 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TRAV5A0A0B4J249 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRAV5A0A0B4J249 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRAV5A0A0B4J249 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRAV5A0A0B4J249 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRAV5A0A0B4J249 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRAV5A0A0B4J249 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
TRAV5A0A0B4J249 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRAV5A0A0B4J249 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRAV5A0A0B4J249 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
TRAV5A0A0B4J249 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC16.49■□□□□ 0.23
TRAV5A0A0B4J249 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRAV5A0A0B4J249 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRAV5A0A0B4J249 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRAV5A0A0B4J249 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRAV5A0A0B4J249 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
TRAV5A0A0B4J249 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC16.49■□□□□ 0.23
TRAV5A0A0B4J249 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC16.49■□□□□ 0.23
TRAV5A0A0B4J249 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC16.49■□□□□ 0.23
TRAV5A0A0B4J249 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
TRAV5A0A0B4J249 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRAV5A0A0B4J249 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRAV5A0A0B4J249 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
TRAV5A0A0B4J249 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRAV5A0A0B4J249 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC16.49■□□□□ 0.23
TRAV5A0A0B4J249 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC16.48■□□□□ 0.23
TRAV5A0A0B4J249 STX4-202ENST00000394998 1498 ntTSL 2 BASIC16.48■□□□□ 0.23
TRAV5A0A0B4J249 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRAV5A0A0B4J249 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC16.48■□□□□ 0.23
TRAV5A0A0B4J249 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
TRAV5A0A0B4J249 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRAV5A0A0B4J249 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRAV5A0A0B4J249 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRAV5A0A0B4J249 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRAV5A0A0B4J249 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRAV5A0A0B4J249 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
TRAV5A0A0B4J249 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRAV5A0A0B4J249 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
TRAV5A0A0B4J249 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRAV5A0A0B4J249 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRAV5A0A0B4J249 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRAV5A0A0B4J249 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
TRAV5A0A0B4J249 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC16.48■□□□□ 0.23
TRAV5A0A0B4J249 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
TRAV5A0A0B4J249 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRAV5A0A0B4J249 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC16.47■□□□□ 0.23
TRAV5A0A0B4J249 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC16.47■□□□□ 0.23
TRAV5A0A0B4J249 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRAV5A0A0B4J249 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRAV5A0A0B4J249 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
TRAV5A0A0B4J249 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC16.47■□□□□ 0.23
TRAV5A0A0B4J249 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
TRAV5A0A0B4J249 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRAV5A0A0B4J249 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRAV5A0A0B4J249 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC16.47■□□□□ 0.23
TRAV5A0A0B4J249 AC241377.3-202ENST00000626088 1088 ntBASIC16.47■□□□□ 0.23
TRAV5A0A0B4J249 AC241585.3-202ENST00000628937 1088 ntBASIC16.47■□□□□ 0.23
TRAV5A0A0B4J249 AC245100.8-202ENST00000629247 1058 ntBASIC16.47■□□□□ 0.23
TRAV5A0A0B4J249 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
TRAV5A0A0B4J249 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRAV5A0A0B4J249 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRAV5A0A0B4J249 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
TRAV5A0A0B4J249 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRAV5A0A0B4J249 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC16.47■□□□□ 0.23
TRAV5A0A0B4J249 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
TRAV5A0A0B4J249 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
TRAV5A0A0B4J249 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC16.46■□□□□ 0.23
TRAV5A0A0B4J249 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
TRAV5A0A0B4J249 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC16.46■□□□□ 0.23
TRAV5A0A0B4J249 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC16.46■□□□□ 0.23
TRAV5A0A0B4J249 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC16.46■□□□□ 0.23
TRAV5A0A0B4J249 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRAV5A0A0B4J249 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRAV5A0A0B4J249 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC16.46■□□□□ 0.22
TRAV5A0A0B4J249 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC16.46■□□□□ 0.22
TRAV5A0A0B4J249 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.22
TRAV5A0A0B4J249 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC16.45■□□□□ 0.22
TRAV5A0A0B4J249 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRAV5A0A0B4J249 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRAV5A0A0B4J249 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
TRAV5A0A0B4J249 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRAV5A0A0B4J249 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRAV5A0A0B4J249 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRAV5A0A0B4J249 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
TRAV5A0A0B4J249 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC16.45■□□□□ 0.22
TRAV5A0A0B4J249 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRAV5A0A0B4J249 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms