Protein–RNA interactions for Protein: A0A0A6YY99

TNFSF12-TNFSF13, Protein TNFSF12-TNFSF13, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF12-TNFSF13A0A0A6YY99 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TNFSF12-TNFSF13A0A0A6YY99 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC19.37■□□□□ 0.69
TNFSF12-TNFSF13A0A0A6YY99 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC19.37■□□□□ 0.69
TNFSF12-TNFSF13A0A0A6YY99 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC19.37■□□□□ 0.69
TNFSF12-TNFSF13A0A0A6YY99 GOLGA2P6-201ENST00000340929 2049 ntBASIC19.37■□□□□ 0.69
TNFSF12-TNFSF13A0A0A6YY99 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC19.37■□□□□ 0.69
TNFSF12-TNFSF13A0A0A6YY99 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
TNFSF12-TNFSF13A0A0A6YY99 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC19.37■□□□□ 0.69
TNFSF12-TNFSF13A0A0A6YY99 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC19.36■□□□□ 0.69
TNFSF12-TNFSF13A0A0A6YY99 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
TNFSF12-TNFSF13A0A0A6YY99 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC19.36■□□□□ 0.69
TNFSF12-TNFSF13A0A0A6YY99 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TNFSF12-TNFSF13A0A0A6YY99 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
TNFSF12-TNFSF13A0A0A6YY99 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC19.36■□□□□ 0.69
TNFSF12-TNFSF13A0A0A6YY99 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TNFSF12-TNFSF13A0A0A6YY99 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC19.36■□□□□ 0.69
TNFSF12-TNFSF13A0A0A6YY99 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
TNFSF12-TNFSF13A0A0A6YY99 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TNFSF12-TNFSF13A0A0A6YY99 KRT18P14-201ENST00000534205 1250 ntBASIC19.36■□□□□ 0.69
TNFSF12-TNFSF13A0A0A6YY99 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC19.36■□□□□ 0.69
TNFSF12-TNFSF13A0A0A6YY99 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
TNFSF12-TNFSF13A0A0A6YY99 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
TNFSF12-TNFSF13A0A0A6YY99 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
TNFSF12-TNFSF13A0A0A6YY99 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC19.36■□□□□ 0.69
TNFSF12-TNFSF13A0A0A6YY99 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
TNFSF12-TNFSF13A0A0A6YY99 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
TNFSF12-TNFSF13A0A0A6YY99 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC19.36■□□□□ 0.69
TNFSF12-TNFSF13A0A0A6YY99 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC19.36■□□□□ 0.69
TNFSF12-TNFSF13A0A0A6YY99 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TNFSF12-TNFSF13A0A0A6YY99 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
TNFSF12-TNFSF13A0A0A6YY99 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
TNFSF12-TNFSF13A0A0A6YY99 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
TNFSF12-TNFSF13A0A0A6YY99 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TNFSF12-TNFSF13A0A0A6YY99 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
TNFSF12-TNFSF13A0A0A6YY99 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TNFSF12-TNFSF13A0A0A6YY99 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
TNFSF12-TNFSF13A0A0A6YY99 LINC00565-201ENST00000562710 2331 ntBASIC19.35■□□□□ 0.69
TNFSF12-TNFSF13A0A0A6YY99 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TNFSF12-TNFSF13A0A0A6YY99 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC19.35■□□□□ 0.69
TNFSF12-TNFSF13A0A0A6YY99 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TNFSF12-TNFSF13A0A0A6YY99 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TNFSF12-TNFSF13A0A0A6YY99 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TNFSF12-TNFSF13A0A0A6YY99 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC19.35■□□□□ 0.69
TNFSF12-TNFSF13A0A0A6YY99 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC19.35■□□□□ 0.69
TNFSF12-TNFSF13A0A0A6YY99 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
TNFSF12-TNFSF13A0A0A6YY99 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
TNFSF12-TNFSF13A0A0A6YY99 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TNFSF12-TNFSF13A0A0A6YY99 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
TNFSF12-TNFSF13A0A0A6YY99 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
TNFSF12-TNFSF13A0A0A6YY99 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
TNFSF12-TNFSF13A0A0A6YY99 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TNFSF12-TNFSF13A0A0A6YY99 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
TNFSF12-TNFSF13A0A0A6YY99 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC19.34■□□□□ 0.69
TNFSF12-TNFSF13A0A0A6YY99 AC010542.4-201ENST00000563151 1910 ntBASIC19.34■□□□□ 0.69
TNFSF12-TNFSF13A0A0A6YY99 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
TNFSF12-TNFSF13A0A0A6YY99 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC19.34■□□□□ 0.69
TNFSF12-TNFSF13A0A0A6YY99 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
TNFSF12-TNFSF13A0A0A6YY99 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC19.34■□□□□ 0.69
TNFSF12-TNFSF13A0A0A6YY99 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
TNFSF12-TNFSF13A0A0A6YY99 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC19.34■□□□□ 0.69
TNFSF12-TNFSF13A0A0A6YY99 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TNFSF12-TNFSF13A0A0A6YY99 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC19.34■□□□□ 0.69
TNFSF12-TNFSF13A0A0A6YY99 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TNFSF12-TNFSF13A0A0A6YY99 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
TNFSF12-TNFSF13A0A0A6YY99 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
TNFSF12-TNFSF13A0A0A6YY99 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC19.34■□□□□ 0.69
TNFSF12-TNFSF13A0A0A6YY99 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
TNFSF12-TNFSF13A0A0A6YY99 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC19.34■□□□□ 0.69
TNFSF12-TNFSF13A0A0A6YY99 BID-212ENST00000614949 1988 ntTSL 5 BASIC19.33■□□□□ 0.69
TNFSF12-TNFSF13A0A0A6YY99 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC19.33■□□□□ 0.69
TNFSF12-TNFSF13A0A0A6YY99 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
TNFSF12-TNFSF13A0A0A6YY99 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
TNFSF12-TNFSF13A0A0A6YY99 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.69
TNFSF12-TNFSF13A0A0A6YY99 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
TNFSF12-TNFSF13A0A0A6YY99 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC19.33■□□□□ 0.68
TNFSF12-TNFSF13A0A0A6YY99 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
TNFSF12-TNFSF13A0A0A6YY99 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC19.33■□□□□ 0.68
TNFSF12-TNFSF13A0A0A6YY99 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC19.33■□□□□ 0.68
TNFSF12-TNFSF13A0A0A6YY99 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC19.33■□□□□ 0.68
TNFSF12-TNFSF13A0A0A6YY99 AC022517.1-201ENST00000592429 346 ntBASIC19.33■□□□□ 0.68
TNFSF12-TNFSF13A0A0A6YY99 CPT2-209ENST00000636935 803 ntTSL 5 BASIC19.33■□□□□ 0.68
TNFSF12-TNFSF13A0A0A6YY99 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
TNFSF12-TNFSF13A0A0A6YY99 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC19.33■□□□□ 0.68
TNFSF12-TNFSF13A0A0A6YY99 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
TNFSF12-TNFSF13A0A0A6YY99 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC19.32■□□□□ 0.68
TNFSF12-TNFSF13A0A0A6YY99 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TNFSF12-TNFSF13A0A0A6YY99 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
TNFSF12-TNFSF13A0A0A6YY99 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
TNFSF12-TNFSF13A0A0A6YY99 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC19.32■□□□□ 0.68
TNFSF12-TNFSF13A0A0A6YY99 AC003102.1-202ENST00000563394 1796 ntBASIC19.32■□□□□ 0.68
TNFSF12-TNFSF13A0A0A6YY99 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TNFSF12-TNFSF13A0A0A6YY99 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TNFSF12-TNFSF13A0A0A6YY99 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC19.32■□□□□ 0.68
TNFSF12-TNFSF13A0A0A6YY99 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TNFSF12-TNFSF13A0A0A6YY99 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC19.32■□□□□ 0.68
TNFSF12-TNFSF13A0A0A6YY99 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC19.32■□□□□ 0.68
TNFSF12-TNFSF13A0A0A6YY99 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
TNFSF12-TNFSF13A0A0A6YY99 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC19.32■□□□□ 0.68
TNFSF12-TNFSF13A0A0A6YY99 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC19.32■□□□□ 0.68
TNFSF12-TNFSF13A0A0A6YY99 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 69.6 ms