Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 DNM1P17-201ENST00000512082 426 ntBASIC12.17□□□□□ -0.46
LMO3Q8TAP4 PTPN20-229ENST00000513756 640 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
LMO3Q8TAP4 AC011389.2-201ENST00000514811 365 ntTSL 2 BASIC12.17□□□□□ -0.46
LMO3Q8TAP4 RNA5SP408-201ENST00000516115 100 ntBASIC12.17□□□□□ -0.46
LMO3Q8TAP4 AC034205.2-201ENST00000517788 1176 ntBASIC12.17□□□□□ -0.46
LMO3Q8TAP4 CCDC90B-211ENST00000529073 719 ntTSL 5 BASIC12.17□□□□□ -0.46
LMO3Q8TAP4 AC007637.1-201ENST00000541704 910 ntTSL 5 BASIC12.17□□□□□ -0.46
LMO3Q8TAP4 CIAPIN1-211ENST00000568940 1137 ntTSL 3 BASIC12.17□□□□□ -0.46
LMO3Q8TAP4 AC110285.1-201ENST00000572077 665 ntTSL 3 BASIC12.17□□□□□ -0.46
LMO3Q8TAP4 AC025682.1-203ENST00000584391 442 ntTSL 2 BASIC12.17□□□□□ -0.46
LMO3Q8TAP4 RN7SL823P-201ENST00000584886 295 ntBASIC12.17□□□□□ -0.46
LMO3Q8TAP4 C19orf54-209ENST00000598485 553 ntTSL 5 BASIC12.17□□□□□ -0.46
LMO3Q8TAP4 AC007128.2-202ENST00000606016 543 ntTSL 4 BASIC12.17□□□□□ -0.46
LMO3Q8TAP4 AC006027.1-201ENST00000608195 741 ntBASIC12.17□□□□□ -0.46
LMO3Q8TAP4 AC079882.1-201ENST00000609433 375 ntBASIC12.17□□□□□ -0.46
LMO3Q8TAP4 CU633906.3-201ENST00000623377 741 ntBASIC12.17□□□□□ -0.46
LMO3Q8TAP4 AC008103.1-201ENST00000623570 1181 ntBASIC12.17□□□□□ -0.46
LMO3Q8TAP4 AC239585.2-202ENST00000624629 434 ntTSL 5 BASIC12.17□□□□□ -0.46
LMO3Q8TAP4 LINC00595-210ENST00000634452 562 ntTSL 2 BASIC12.17□□□□□ -0.46
LMO3Q8TAP4 GAGE12F-202ENST00000639028 585 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
LMO3Q8TAP4 TCF12-202ENST00000333725 4719 ntAPPRIS P4 TSL 1 (best) BASIC12.17□□□□□ -0.46
LMO3Q8TAP4 RTN3-203ENST00000341307 2524 ntTSL 2 BASIC12.17□□□□□ -0.46
LMO3Q8TAP4 TRPA1-201ENST00000262209 5223 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
LMO3Q8TAP4 AL354796.1-201ENST00000623292 1951 ntBASIC12.17□□□□□ -0.46
LMO3Q8TAP4 BCAR3-202ENST00000370243 3200 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
LMO3Q8TAP4 ASPH-201ENST00000356457 3730 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
LMO3Q8TAP4 PAMR1-206ENST00000615849 2801 ntTSL 2 BASIC12.17□□□□□ -0.46
LMO3Q8TAP4 ZDHHC15-201ENST00000373367 5796 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
LMO3Q8TAP4 ARHGAP21-203ENST00000396432 7167 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
LMO3Q8TAP4 LVRN-202ENST00000395528 4544 ntTSL 5 BASIC12.17□□□□□ -0.46
LMO3Q8TAP4 CACNA2D4-219ENST00000585708 3273 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
LMO3Q8TAP4 LINC02128-203ENST00000576842 2248 ntTSL 3 BASIC12.17□□□□□ -0.46
LMO3Q8TAP4 DDR1-232ENST00000418800 3588 ntAPPRIS P3 TSL 2 BASIC12.17□□□□□ -0.46
LMO3Q8TAP4 ADAMTS7P3-201ENST00000566116 3716 ntBASIC12.16□□□□□ -0.46
LMO3Q8TAP4 S1PR3-201ENST00000358157 4206 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
LMO3Q8TAP4 LINC00330-201ENST00000414562 2036 ntTSL 2 BASIC12.16□□□□□ -0.46
LMO3Q8TAP4 AC020915.6-201ENST00000637233 3042 ntAPPRIS P5 TSL 5 BASIC12.16□□□□□ -0.46
LMO3Q8TAP4 PPT1-219ENST00000642050 4010 ntAPPRIS P2 BASIC12.16□□□□□ -0.46
LMO3Q8TAP4 CH25H-201ENST00000371852 1686 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
LMO3Q8TAP4 PIH1D3-202ENST00000372453 1652 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
LMO3Q8TAP4 AL359736.1-201ENST00000382141 4157 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
LMO3Q8TAP4 PDXDC2P-NPIPB14P-205ENST00000531894 4184 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
LMO3Q8TAP4 BARD1-201ENST00000260947 5499 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
LMO3Q8TAP4 GABRB2-204ENST00000517547 1349 ntTSL 2 BASIC12.16□□□□□ -0.46
LMO3Q8TAP4 AC069061.4-201ENST00000581294 1347 ntBASIC12.16□□□□□ -0.46
LMO3Q8TAP4 REV3L-207ENST00000435970 10943 ntTSL 2 BASIC12.16□□□□□ -0.46
LMO3Q8TAP4 TRIM26-268ENST00000454678 3478 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
LMO3Q8TAP4 WWP2-201ENST00000356003 4227 ntTSL 2 BASIC12.16□□□□□ -0.46
LMO3Q8TAP4 UGT1A10-201ENST00000344644 2408 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
LMO3Q8TAP4 FAM13B-202ENST00000420893 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
LMO3Q8TAP4 PDE2A-202ENST00000376450 3355 ntTSL 2 BASIC12.16□□□□□ -0.46
LMO3Q8TAP4 PMS2-206ENST00000441476 2730 ntTSL 5 BASIC12.16□□□□□ -0.46
LMO3Q8TAP4 PELO-201ENST00000274311 4349 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
LMO3Q8TAP4 AL356414.1-201ENST00000379526 686 ntTSL 3 BASIC12.16□□□□□ -0.46
LMO3Q8TAP4 MAPK12-202ENST00000395778 605 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
LMO3Q8TAP4 RAB1C-201ENST00000409159 606 ntBASIC12.16□□□□□ -0.46
LMO3Q8TAP4 AL591479.1-201ENST00000417001 635 ntBASIC12.16□□□□□ -0.46
LMO3Q8TAP4 IL6RP1-201ENST00000417848 1273 ntBASIC12.16□□□□□ -0.46
LMO3Q8TAP4 AC000078.1-201ENST00000420617 682 ntBASIC12.16□□□□□ -0.46
LMO3Q8TAP4 BOLL-205ENST00000433157 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
LMO3Q8TAP4 LINC00539-203ENST00000434601 960 ntTSL 5 BASIC12.16□□□□□ -0.46
LMO3Q8TAP4 AC018693.2-201ENST00000435255 530 ntBASIC12.16□□□□□ -0.46
LMO3Q8TAP4 IGHV4-31-201ENST00000438142 428 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
LMO3Q8TAP4 RRNAD1-204ENST00000476229 1096 ntTSL 5 BASIC12.16□□□□□ -0.46
LMO3Q8TAP4 LSP1P2-201ENST00000479042 133 ntBASIC12.16□□□□□ -0.46
LMO3Q8TAP4 SNORA74.2-201ENST00000516496 180 ntBASIC12.16□□□□□ -0.46
LMO3Q8TAP4 ALG1L13P-201ENST00000518201 521 ntTSL 5 BASIC12.16□□□□□ -0.46
LMO3Q8TAP4 FAM86B1-215ENST00000533513 725 ntTSL 5 BASIC12.16□□□□□ -0.46
LMO3Q8TAP4 AC002351.1-201ENST00000546852 590 ntTSL 2 BASIC12.16□□□□□ -0.46
LMO3Q8TAP4 AL031058.1-201ENST00000561592 888 ntBASIC12.16□□□□□ -0.46
LMO3Q8TAP4 AC090398.1-201ENST00000562795 1179 ntBASIC12.16□□□□□ -0.46
LMO3Q8TAP4 PDPR-208ENST00000567046 1207 ntTSL 2 BASIC12.16□□□□□ -0.46
LMO3Q8TAP4 SAT2-208ENST00000573566 640 ntTSL 2 BASIC12.16□□□□□ -0.46
LMO3Q8TAP4 ANAPC11-214ENST00000578544 403 ntTSL 3 BASIC12.16□□□□□ -0.46
LMO3Q8TAP4 ZNF544-203ENST00000594384 588 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
LMO3Q8TAP4 OPN1MW-201ENST00000595290 1242 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
LMO3Q8TAP4 LINC00539-204ENST00000608957 869 ntTSL 5 BASIC12.16□□□□□ -0.46
LMO3Q8TAP4 ADGRG5-207ENST00000615867 762 ntTSL 4 BASIC12.16□□□□□ -0.46
LMO3Q8TAP4 NEAT1_1.1-201ENST00000620348 120 ntBASIC12.16□□□□□ -0.46
LMO3Q8TAP4 KRTAP4-7-202ENST00000621138 423 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
LMO3Q8TAP4 LINC01395-201ENST00000631195 982 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
LMO3Q8TAP4 AC006453.2-203ENST00000637196 774 ntTSL 2 BASIC12.16□□□□□ -0.46
LMO3Q8TAP4 SLC7A8-204ENST00000422941 3018 ntTSL 2 BASIC12.16□□□□□ -0.46
LMO3Q8TAP4 CCDC81-201ENST00000354755 2510 ntTSL 2 BASIC12.16□□□□□ -0.46
LMO3Q8TAP4 CYTH1-210ENST00000589297 3756 ntTSL 5 BASIC12.16□□□□□ -0.46
LMO3Q8TAP4 COX16-201ENST00000389912 1717 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
LMO3Q8TAP4 SPTBN2-209ENST00000533211 8128 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
LMO3Q8TAP4 PTPRS-202ENST00000353284 4518 ntTSL 5 BASIC12.16□□□□□ -0.46
LMO3Q8TAP4 PHF20-203ENST00000374012 5922 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
LMO3Q8TAP4 STK38-201ENST00000229812 3576 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
LMO3Q8TAP4 CCDC144NL-AS1-207ENST00000577537 3727 ntTSL 2 BASIC12.16□□□□□ -0.46
LMO3Q8TAP4 MPP4-207ENST00000428900 2320 ntTSL 2 BASIC12.16□□□□□ -0.46
LMO3Q8TAP4 GOSR2-239ENST00000640608 3871 ntTSL 2 BASIC12.16□□□□□ -0.46
LMO3Q8TAP4 PRMT5-AS1-201ENST00000424245 2613 ntTSL 2 BASIC12.16□□□□□ -0.46
LMO3Q8TAP4 CNTN2-201ENST00000331830 7999 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
LMO3Q8TAP4 ACCSL-201ENST00000378832 1820 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
LMO3Q8TAP4 FAM46A-202ENST00000369754 5664 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
LMO3Q8TAP4 CSGALNACT2-201ENST00000374466 3730 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
LMO3Q8TAP4 ZNF566-209ENST00000493391 3425 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
LMO3Q8TAP4 SLC18A1-204ENST00000437980 2822 ntTSL 5 BASIC12.15□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 219.5 ms