Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 TNNI1-207ENST00000622580 6142 ntAPPRIS ALT1 TSL 1 (best) BASIC12.19□□□□□ -0.46
LMO3Q8TAP4 WBP11-201ENST00000261167 4646 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
LMO3Q8TAP4 PCDHGA9-201ENST00000573521 4605 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
LMO3Q8TAP4 DDR1-223ENST00000324771 4148 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
LMO3Q8TAP4 ABCG1-206ENST00000398457 3119 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
LMO3Q8TAP4 EIF3C-209ENST00000566501 3128 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
LMO3Q8TAP4 PIGO-203ENST00000378617 4066 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
LMO3Q8TAP4 KDM6A-214ENST00000621147 2876 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
LMO3Q8TAP4 IPO7-201ENST00000379719 6191 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
LMO3Q8TAP4 WNK4-201ENST00000246914 4001 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
LMO3Q8TAP4 TRMT11-202ENST00000368332 1889 ntAPPRIS ALT1 TSL 2 BASIC12.19□□□□□ -0.46
LMO3Q8TAP4 JADE1-201ENST00000226319 5772 ntAPPRIS P3 TSL 5 BASIC12.18□□□□□ -0.46
LMO3Q8TAP4 THSD4-202ENST00000355327 9200 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
LMO3Q8TAP4 GOLGA6C-201ENST00000300576 2082 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
LMO3Q8TAP4 CCDC112-202ENST00000395557 2069 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
LMO3Q8TAP4 AC025588.1-201ENST00000594883 2072 ntBASIC12.18□□□□□ -0.46
LMO3Q8TAP4 FAM124B-203ENST00000409685 2509 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
LMO3Q8TAP4 DAB1-203ENST00000371231 1802 ntTSL 5 BASIC12.18□□□□□ -0.46
LMO3Q8TAP4 AC106801.1-201ENST00000518054 1845 ntTSL 5 BASIC12.18□□□□□ -0.46
LMO3Q8TAP4 PAX3-204ENST00000350526 3610 ntAPPRIS ALT1 TSL 5 BASIC12.18□□□□□ -0.46
LMO3Q8TAP4 APLF-201ENST00000303795 3847 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
LMO3Q8TAP4 UQCC1-202ENST00000359226 2036 ntTSL 4 BASIC12.18□□□□□ -0.46
LMO3Q8TAP4 CCDC36-202ENST00000366429 1568 ntTSL 2 BASIC12.18□□□□□ -0.46
LMO3Q8TAP4 NME6-205ENST00000421967 2004 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
LMO3Q8TAP4 LOX-201ENST00000231004 5102 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
LMO3Q8TAP4 TACC2-204ENST00000360561 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
LMO3Q8TAP4 AC016831.6-201ENST00000604514 1517 ntBASIC12.18□□□□□ -0.46
LMO3Q8TAP4 CSE1L-202ENST00000396192 3459 ntTSL 5 BASIC12.18□□□□□ -0.46
LMO3Q8TAP4 RUNX1T1-202ENST00000360348 2370 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
LMO3Q8TAP4 ROPN1B-201ENST00000251776 1026 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
LMO3Q8TAP4 ANP32D-201ENST00000266594 960 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
LMO3Q8TAP4 C2orf70-202ENST00000409392 764 ntTSL 3 BASIC12.18□□□□□ -0.46
LMO3Q8TAP4 THRB-AS1-201ENST00000432368 1216 ntTSL 2 BASIC12.18□□□□□ -0.46
LMO3Q8TAP4 AC011290.1-201ENST00000439751 414 ntTSL 5 BASIC12.18□□□□□ -0.46
LMO3Q8TAP4 AC010745.1-201ENST00000444804 637 ntTSL 3 BASIC12.18□□□□□ -0.46
LMO3Q8TAP4 GPAA1P1-201ENST00000453019 931 ntBASIC12.18□□□□□ -0.46
LMO3Q8TAP4 CLDN16-202ENST00000456423 430 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
LMO3Q8TAP4 SUB1-213ENST00000515355 771 ntAPPRIS P1 TSL 3 BASIC12.18□□□□□ -0.46
LMO3Q8TAP4 AL357093.2-201ENST00000555407 601 ntTSL 3 BASIC12.18□□□□□ -0.46
LMO3Q8TAP4 AL132801.1-202ENST00000559402 564 ntTSL 4 BASIC12.18□□□□□ -0.46
LMO3Q8TAP4 AC005154.1-202ENST00000578293 999 ntTSL 5 BASIC12.18□□□□□ -0.46
LMO3Q8TAP4 SLC38A3-206ENST00000614032 2978 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
LMO3Q8TAP4 AC040169.3-201ENST00000622369 612 ntBASIC12.18□□□□□ -0.46
LMO3Q8TAP4 KLHDC4-205ENST00000446344 4444 ntBASIC12.18□□□□□ -0.46
LMO3Q8TAP4 SNHG1-206ENST00000537925 1487 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
LMO3Q8TAP4 LEXM-202ENST00000371273 1651 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
LMO3Q8TAP4 GFM2-203ENST00000427854 1870 ntTSL 2 BASIC12.18□□□□□ -0.46
LMO3Q8TAP4 SYVN1-206ENST00000526060 3144 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
LMO3Q8TAP4 TREML4-201ENST00000341495 2070 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
LMO3Q8TAP4 AC010867.1-201ENST00000558038 2289 ntBASIC12.18□□□□□ -0.46
LMO3Q8TAP4 WDR47-202ENST00000361054 4115 ntTSL 5 BASIC12.18□□□□□ -0.46
LMO3Q8TAP4 KCNAB2-204ENST00000378083 4142 ntTSL 2 BASIC12.18□□□□□ -0.46
LMO3Q8TAP4 TSTD2-201ENST00000341170 4320 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
LMO3Q8TAP4 CLU-201ENST00000316403 3080 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
LMO3Q8TAP4 WARS-202ENST00000355338 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
LMO3Q8TAP4 GFM1-201ENST00000264263 3453 ntTSL 5 BASIC12.18□□□□□ -0.46
LMO3Q8TAP4 MYBPC3-201ENST00000256993 4217 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
LMO3Q8TAP4 MYBPC3-202ENST00000399249 4217 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
LMO3Q8TAP4 PAPD4-207ENST00000504233 2997 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
LMO3Q8TAP4 ELP2-204ENST00000423854 2385 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
LMO3Q8TAP4 KIR3DL1-202ENST00000358178 1564 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
LMO3Q8TAP4 FAM131A-211ENST00000639617 4450 ntTSL 5 BASIC12.17□□□□□ -0.46
LMO3Q8TAP4 AC126603.1-201ENST00000557586 2512 ntBASIC12.17□□□□□ -0.46
LMO3Q8TAP4 BIVM-201ENST00000257336 3859 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
LMO3Q8TAP4 GGA3-213ENST00000582486 2319 ntTSL 5 BASIC12.17□□□□□ -0.46
LMO3Q8TAP4 IGF2BP2-AS1-201ENST00000296270 1924 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
LMO3Q8TAP4 AGAP11-201ENST00000433214 3078 ntTSL 2 BASIC12.17□□□□□ -0.46
LMO3Q8TAP4 SLC36A3-202ENST00000377713 1720 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
LMO3Q8TAP4 F2R-201ENST00000319211 3821 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
LMO3Q8TAP4 GPSM2-202ENST00000406462 7433 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
LMO3Q8TAP4 NCOR2-204ENST00000405201 8533 ntAPPRIS P4 TSL 1 (best) BASIC12.17□□□□□ -0.46
LMO3Q8TAP4 SMARCE1-203ENST00000377808 1307 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
LMO3Q8TAP4 LGMNP1-201ENST00000441282 1300 ntBASIC12.17□□□□□ -0.46
LMO3Q8TAP4 AC131649.1-201ENST00000569215 1313 ntBASIC12.17□□□□□ -0.46
LMO3Q8TAP4 RAB7B-202ENST00000617991 3014 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
LMO3Q8TAP4 PDE5A-202ENST00000354960 7154 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
LMO3Q8TAP4 NAGA-203ENST00000403363 1856 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
LMO3Q8TAP4 WDR6-207ENST00000448293 3377 ntTSL 2 BASIC12.17□□□□□ -0.46
LMO3Q8TAP4 MASP1-204ENST00000392470 1673 ntTSL 2 BASIC12.17□□□□□ -0.46
LMO3Q8TAP4 AL008628.1-201ENST00000564198 5187 ntBASIC12.17□□□□□ -0.46
LMO3Q8TAP4 MED8-201ENST00000290663 1483 ntTSL 5 BASIC12.17□□□□□ -0.46
LMO3Q8TAP4 CES5A-202ENST00000319165 2016 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
LMO3Q8TAP4 AC098679.3-201ENST00000512016 3115 ntTSL 2 BASIC12.17□□□□□ -0.46
LMO3Q8TAP4 PEX1-203ENST00000428214 3681 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
LMO3Q8TAP4 PEX5L-205ENST00000464614 1817 ntAPPRIS ALT2 TSL 2 BASIC12.17□□□□□ -0.46
LMO3Q8TAP4 IMMP1L-201ENST00000278200 795 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
LMO3Q8TAP4 ERCC1-202ENST00000300853 3828 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
LMO3Q8TAP4 C11orf42-201ENST00000316375 1142 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
LMO3Q8TAP4 LINC00469-201ENST00000321800 708 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
LMO3Q8TAP4 DBI-202ENST00000355857 637 ntAPPRIS ALT1 TSL 1 (best) BASIC12.17□□□□□ -0.46
LMO3Q8TAP4 RAB13-201ENST00000368575 1176 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
LMO3Q8TAP4 FGF1-206ENST00000407758 759 ntTSL 5 BASIC12.17□□□□□ -0.46
LMO3Q8TAP4 CATIP-AS2-201ENST00000411433 535 ntTSL 3 BASIC12.17□□□□□ -0.46
LMO3Q8TAP4 AL355574.1-201ENST00000423793 311 ntTSL 5 BASIC12.17□□□□□ -0.46
LMO3Q8TAP4 GSTK1-205ENST00000443571 850 ntTSL 2 BASIC12.17□□□□□ -0.46
LMO3Q8TAP4 RN7SL424P-201ENST00000468013 289 ntBASIC12.17□□□□□ -0.46
LMO3Q8TAP4 RN7SL801P-201ENST00000479462 302 ntBASIC12.17□□□□□ -0.46
LMO3Q8TAP4 DLG4-206ENST00000485100 1004 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
LMO3Q8TAP4 C3orf38-204ENST00000486971 1259 ntTSL 2 BASIC12.17□□□□□ -0.46
LMO3Q8TAP4 CAP2-207ENST00000493172 861 ntTSL 2 BASIC12.17□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 68.4 ms