Protein–RNA interactions for Protein: Q9Y5Y9

SCN10A, Sodium channel protein type 10 subunit alpha, humanhuman

Predictions only

Length 1,956 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN10AQ9Y5Y9 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC23.64■■□□□ 1.38
SCN10AQ9Y5Y9 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC23.64■■□□□ 1.38
SCN10AQ9Y5Y9 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC23.64■■□□□ 1.37
SCN10AQ9Y5Y9 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC23.63■■□□□ 1.37
SCN10AQ9Y5Y9 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC23.63■■□□□ 1.37
SCN10AQ9Y5Y9 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC23.63■■□□□ 1.37
SCN10AQ9Y5Y9 ITM2C-210ENST00000620962 501 ntBASIC23.63■■□□□ 1.37
SCN10AQ9Y5Y9 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC23.63■■□□□ 1.37
SCN10AQ9Y5Y9 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC23.63■■□□□ 1.37
SCN10AQ9Y5Y9 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC23.63■■□□□ 1.37
SCN10AQ9Y5Y9 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC23.63■■□□□ 1.37
SCN10AQ9Y5Y9 AC137767.1-201ENST00000602918 1920 ntBASIC23.63■■□□□ 1.37
SCN10AQ9Y5Y9 GCA-201ENST00000233612 1694 ntTSL 2 BASIC23.63■■□□□ 1.37
SCN10AQ9Y5Y9 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
SCN10AQ9Y5Y9 AL512625.2-201ENST00000417533 625 ntBASIC23.63■■□□□ 1.37
SCN10AQ9Y5Y9 RNA5SP413-201ENST00000516373 109 ntBASIC23.63■■□□□ 1.37
SCN10AQ9Y5Y9 MIR4758-201ENST00000577688 71 ntBASIC23.63■■□□□ 1.37
SCN10AQ9Y5Y9 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC23.63■■□□□ 1.37
SCN10AQ9Y5Y9 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC23.63■■□□□ 1.37
SCN10AQ9Y5Y9 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC23.63■■□□□ 1.37
SCN10AQ9Y5Y9 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC23.62■■□□□ 1.37
SCN10AQ9Y5Y9 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
SCN10AQ9Y5Y9 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC23.62■■□□□ 1.37
SCN10AQ9Y5Y9 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC23.62■■□□□ 1.37
SCN10AQ9Y5Y9 AC008687.6-201ENST00000596318 630 ntBASIC23.62■■□□□ 1.37
SCN10AQ9Y5Y9 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC23.62■■□□□ 1.37
SCN10AQ9Y5Y9 MYC-209ENST00000641252 345 ntBASIC23.62■■□□□ 1.37
SCN10AQ9Y5Y9 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
SCN10AQ9Y5Y9 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC23.62■■□□□ 1.37
SCN10AQ9Y5Y9 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
SCN10AQ9Y5Y9 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC23.61■■□□□ 1.37
SCN10AQ9Y5Y9 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
SCN10AQ9Y5Y9 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
SCN10AQ9Y5Y9 KRT16P2-201ENST00000414673 1423 ntBASIC23.61■■□□□ 1.37
SCN10AQ9Y5Y9 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC23.61■■□□□ 1.37
SCN10AQ9Y5Y9 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
SCN10AQ9Y5Y9 AC093827.2-201ENST00000512654 315 ntBASIC23.61■■□□□ 1.37
SCN10AQ9Y5Y9 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
SCN10AQ9Y5Y9 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC23.61■■□□□ 1.37
SCN10AQ9Y5Y9 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC23.61■■□□□ 1.37
SCN10AQ9Y5Y9 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC23.61■■□□□ 1.37
SCN10AQ9Y5Y9 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC23.61■■□□□ 1.37
SCN10AQ9Y5Y9 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC23.6■■□□□ 1.37
SCN10AQ9Y5Y9 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC23.6■■□□□ 1.37
SCN10AQ9Y5Y9 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC23.6■■□□□ 1.37
SCN10AQ9Y5Y9 AL162412.1-201ENST00000567129 965 ntBASIC23.6■■□□□ 1.37
SCN10AQ9Y5Y9 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC23.6■■□□□ 1.37
SCN10AQ9Y5Y9 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC23.6■■□□□ 1.37
SCN10AQ9Y5Y9 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
SCN10AQ9Y5Y9 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC23.6■■□□□ 1.37
SCN10AQ9Y5Y9 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
SCN10AQ9Y5Y9 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC23.6■■□□□ 1.37
SCN10AQ9Y5Y9 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
SCN10AQ9Y5Y9 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
SCN10AQ9Y5Y9 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
SCN10AQ9Y5Y9 MIPEPP3-201ENST00000412105 444 ntBASIC23.6■■□□□ 1.37
SCN10AQ9Y5Y9 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
SCN10AQ9Y5Y9 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
SCN10AQ9Y5Y9 AC093787.1-201ENST00000450396 207 ntBASIC23.6■■□□□ 1.37
SCN10AQ9Y5Y9 AC092118.2-201ENST00000613495 667 ntBASIC23.6■■□□□ 1.37
SCN10AQ9Y5Y9 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
SCN10AQ9Y5Y9 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC23.59■■□□□ 1.37
SCN10AQ9Y5Y9 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC23.59■■□□□ 1.37
SCN10AQ9Y5Y9 RBM17P2-201ENST00000616397 1405 ntBASIC23.59■■□□□ 1.37
SCN10AQ9Y5Y9 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC23.59■■□□□ 1.37
SCN10AQ9Y5Y9 POU5F1P4-201ENST00000413175 1085 ntBASIC23.59■■□□□ 1.37
SCN10AQ9Y5Y9 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC23.59■■□□□ 1.37
SCN10AQ9Y5Y9 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
SCN10AQ9Y5Y9 AC008175.2-201ENST00000612840 297 ntBASIC23.59■■□□□ 1.37
SCN10AQ9Y5Y9 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC23.59■■□□□ 1.37
SCN10AQ9Y5Y9 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
SCN10AQ9Y5Y9 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
SCN10AQ9Y5Y9 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
SCN10AQ9Y5Y9 AC069236.1-201ENST00000604339 616 ntBASIC23.58■■□□□ 1.37
SCN10AQ9Y5Y9 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC23.58■■□□□ 1.37
SCN10AQ9Y5Y9 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
SCN10AQ9Y5Y9 FAM201B-201ENST00000458407 597 ntBASIC23.58■■□□□ 1.36
SCN10AQ9Y5Y9 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC23.57■■□□□ 1.36
SCN10AQ9Y5Y9 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
SCN10AQ9Y5Y9 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC23.57■■□□□ 1.36
SCN10AQ9Y5Y9 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
SCN10AQ9Y5Y9 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
SCN10AQ9Y5Y9 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
SCN10AQ9Y5Y9 RHEB-204ENST00000472642 900 ntTSL 3 BASIC23.57■■□□□ 1.36
SCN10AQ9Y5Y9 RNF146-206ENST00000480444 843 ntTSL 2 BASIC23.57■■□□□ 1.36
SCN10AQ9Y5Y9 FGF8-207ENST00000618991 856 ntTSL 3 BASIC23.57■■□□□ 1.36
SCN10AQ9Y5Y9 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC23.57■■□□□ 1.36
SCN10AQ9Y5Y9 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC23.57■■□□□ 1.36
SCN10AQ9Y5Y9 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC23.56■■□□□ 1.36
SCN10AQ9Y5Y9 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC23.56■■□□□ 1.36
SCN10AQ9Y5Y9 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
SCN10AQ9Y5Y9 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
SCN10AQ9Y5Y9 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
SCN10AQ9Y5Y9 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC23.56■■□□□ 1.36
SCN10AQ9Y5Y9 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC23.56■■□□□ 1.36
SCN10AQ9Y5Y9 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC23.56■■□□□ 1.36
SCN10AQ9Y5Y9 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC23.56■■□□□ 1.36
SCN10AQ9Y5Y9 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC23.56■■□□□ 1.36
SCN10AQ9Y5Y9 AC139530.1-201ENST00000575312 1977 ntBASIC23.56■■□□□ 1.36
SCN10AQ9Y5Y9 BX276092.2-201ENST00000417668 665 ntBASIC23.55■■□□□ 1.36
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms