Protein–RNA interactions for Protein: Q9Y5P3

RAI2, Retinoic acid-induced protein 2, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI2Q9Y5P3 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC21.59■■□□□ 1.05
RAI2Q9Y5P3 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC21.59■■□□□ 1.05
RAI2Q9Y5P3 AC026471.6-201ENST00000622954 1905 ntBASIC21.59■■□□□ 1.05
RAI2Q9Y5P3 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC21.59■■□□□ 1.05
RAI2Q9Y5P3 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
RAI2Q9Y5P3 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
RAI2Q9Y5P3 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC21.59■■□□□ 1.05
RAI2Q9Y5P3 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC21.59■■□□□ 1.05
RAI2Q9Y5P3 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC21.59■■□□□ 1.05
RAI2Q9Y5P3 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC21.59■■□□□ 1.05
RAI2Q9Y5P3 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC21.59■■□□□ 1.05
RAI2Q9Y5P3 DUX4L2-201ENST00000561772 1275 ntBASIC21.59■■□□□ 1.05
RAI2Q9Y5P3 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC21.59■■□□□ 1.05
RAI2Q9Y5P3 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC21.59■■□□□ 1.05
RAI2Q9Y5P3 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC21.59■■□□□ 1.05
RAI2Q9Y5P3 DUX4L6-201ENST00000626483 1275 ntBASIC21.59■■□□□ 1.05
RAI2Q9Y5P3 DUX4L1-201ENST00000627662 1275 ntBASIC21.59■■□□□ 1.05
RAI2Q9Y5P3 DUX4L8-201ENST00000629013 1275 ntBASIC21.59■■□□□ 1.05
RAI2Q9Y5P3 DUX4L3-201ENST00000630187 1275 ntBASIC21.59■■□□□ 1.05
RAI2Q9Y5P3 DUX4L7-201ENST00000630678 1275 ntBASIC21.59■■□□□ 1.05
RAI2Q9Y5P3 DUX4L5-201ENST00000630834 1275 ntBASIC21.59■■□□□ 1.05
RAI2Q9Y5P3 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
RAI2Q9Y5P3 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
RAI2Q9Y5P3 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC21.59■■□□□ 1.05
RAI2Q9Y5P3 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
RAI2Q9Y5P3 MYB-221ENST00000527615 2381 ntTSL 5 BASIC21.59■■□□□ 1.05
RAI2Q9Y5P3 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC21.59■■□□□ 1.05
RAI2Q9Y5P3 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
RAI2Q9Y5P3 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
RAI2Q9Y5P3 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC21.58■■□□□ 1.05
RAI2Q9Y5P3 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
RAI2Q9Y5P3 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
RAI2Q9Y5P3 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC21.58■■□□□ 1.05
RAI2Q9Y5P3 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC21.58■■□□□ 1.05
RAI2Q9Y5P3 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
RAI2Q9Y5P3 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
RAI2Q9Y5P3 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
RAI2Q9Y5P3 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC21.58■■□□□ 1.05
RAI2Q9Y5P3 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC21.58■■□□□ 1.05
RAI2Q9Y5P3 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
RAI2Q9Y5P3 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
RAI2Q9Y5P3 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
RAI2Q9Y5P3 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.04
RAI2Q9Y5P3 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
RAI2Q9Y5P3 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
RAI2Q9Y5P3 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
RAI2Q9Y5P3 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC21.58■■□□□ 1.04
RAI2Q9Y5P3 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC21.58■■□□□ 1.04
RAI2Q9Y5P3 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
RAI2Q9Y5P3 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
RAI2Q9Y5P3 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC21.57■■□□□ 1.04
RAI2Q9Y5P3 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
RAI2Q9Y5P3 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
RAI2Q9Y5P3 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
RAI2Q9Y5P3 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
RAI2Q9Y5P3 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC21.57■■□□□ 1.04
RAI2Q9Y5P3 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
RAI2Q9Y5P3 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
RAI2Q9Y5P3 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
RAI2Q9Y5P3 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
RAI2Q9Y5P3 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
RAI2Q9Y5P3 CCDC92B-201ENST00000575506 885 ntBASIC21.57■■□□□ 1.04
RAI2Q9Y5P3 TERF1P2-201ENST00000583350 1212 ntBASIC21.57■■□□□ 1.04
RAI2Q9Y5P3 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC21.57■■□□□ 1.04
RAI2Q9Y5P3 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC21.57■■□□□ 1.04
RAI2Q9Y5P3 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
RAI2Q9Y5P3 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
RAI2Q9Y5P3 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
RAI2Q9Y5P3 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC21.57■■□□□ 1.04
RAI2Q9Y5P3 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC21.57■■□□□ 1.04
RAI2Q9Y5P3 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC21.57■■□□□ 1.04
RAI2Q9Y5P3 AC079834.2-201ENST00000609776 1949 ntBASIC21.57■■□□□ 1.04
RAI2Q9Y5P3 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC21.56■■□□□ 1.04
RAI2Q9Y5P3 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC21.56■■□□□ 1.04
RAI2Q9Y5P3 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC21.56■■□□□ 1.04
RAI2Q9Y5P3 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC21.56■■□□□ 1.04
RAI2Q9Y5P3 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
RAI2Q9Y5P3 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
RAI2Q9Y5P3 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC21.56■■□□□ 1.04
RAI2Q9Y5P3 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
RAI2Q9Y5P3 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC21.56■■□□□ 1.04
RAI2Q9Y5P3 CPT2-209ENST00000636935 803 ntTSL 5 BASIC21.56■■□□□ 1.04
RAI2Q9Y5P3 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC21.56■■□□□ 1.04
RAI2Q9Y5P3 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
RAI2Q9Y5P3 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC21.56■■□□□ 1.04
RAI2Q9Y5P3 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
RAI2Q9Y5P3 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
RAI2Q9Y5P3 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
RAI2Q9Y5P3 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
RAI2Q9Y5P3 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
RAI2Q9Y5P3 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC21.55■■□□□ 1.04
RAI2Q9Y5P3 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC21.55■■□□□ 1.04
RAI2Q9Y5P3 KRT18P14-201ENST00000534205 1250 ntBASIC21.55■■□□□ 1.04
RAI2Q9Y5P3 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC21.55■■□□□ 1.04
RAI2Q9Y5P3 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC21.55■■□□□ 1.04
RAI2Q9Y5P3 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
RAI2Q9Y5P3 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
RAI2Q9Y5P3 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
RAI2Q9Y5P3 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
RAI2Q9Y5P3 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms