Protein–RNA interactions for Protein: Q9Y5G3

PCDHGB1, Protocadherin gamma-B1, humanhuman

Predictions only

Length 927 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1Q9Y5G3 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC19.48■□□□□ 0.71
PCDHGB1Q9Y5G3 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PCDHGB1Q9Y5G3 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PCDHGB1Q9Y5G3 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PCDHGB1Q9Y5G3 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PCDHGB1Q9Y5G3 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
PCDHGB1Q9Y5G3 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PCDHGB1Q9Y5G3 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
PCDHGB1Q9Y5G3 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PCDHGB1Q9Y5G3 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
PCDHGB1Q9Y5G3 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
PCDHGB1Q9Y5G3 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PCDHGB1Q9Y5G3 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC19.47■□□□□ 0.71
PCDHGB1Q9Y5G3 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PCDHGB1Q9Y5G3 OXCT2P1-201ENST00000447263 1535 ntBASIC19.47■□□□□ 0.71
PCDHGB1Q9Y5G3 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PCDHGB1Q9Y5G3 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
PCDHGB1Q9Y5G3 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC19.47■□□□□ 0.71
PCDHGB1Q9Y5G3 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PCDHGB1Q9Y5G3 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC19.47■□□□□ 0.71
PCDHGB1Q9Y5G3 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
PCDHGB1Q9Y5G3 MIR935-201ENST00000401179 91 ntBASIC19.47■□□□□ 0.71
PCDHGB1Q9Y5G3 AL356441.2-201ENST00000443009 864 ntBASIC19.47■□□□□ 0.71
PCDHGB1Q9Y5G3 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
PCDHGB1Q9Y5G3 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PCDHGB1Q9Y5G3 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
PCDHGB1Q9Y5G3 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PCDHGB1Q9Y5G3 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PCDHGB1Q9Y5G3 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PCDHGB1Q9Y5G3 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
PCDHGB1Q9Y5G3 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC19.47■□□□□ 0.71
PCDHGB1Q9Y5G3 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC19.47■□□□□ 0.71
PCDHGB1Q9Y5G3 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
PCDHGB1Q9Y5G3 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
PCDHGB1Q9Y5G3 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC19.46■□□□□ 0.71
PCDHGB1Q9Y5G3 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
PCDHGB1Q9Y5G3 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC19.46■□□□□ 0.71
PCDHGB1Q9Y5G3 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC19.46■□□□□ 0.71
PCDHGB1Q9Y5G3 ASB1-202ENST00000409297 878 ntTSL 5 BASIC19.46■□□□□ 0.71
PCDHGB1Q9Y5G3 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PCDHGB1Q9Y5G3 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
PCDHGB1Q9Y5G3 AC137630.3-201ENST00000607245 391 ntBASIC19.46■□□□□ 0.71
PCDHGB1Q9Y5G3 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC19.46■□□□□ 0.71
PCDHGB1Q9Y5G3 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
PCDHGB1Q9Y5G3 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC19.46■□□□□ 0.71
PCDHGB1Q9Y5G3 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
PCDHGB1Q9Y5G3 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
PCDHGB1Q9Y5G3 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PCDHGB1Q9Y5G3 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PCDHGB1Q9Y5G3 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PCDHGB1Q9Y5G3 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC19.46■□□□□ 0.71
PCDHGB1Q9Y5G3 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC19.45■□□□□ 0.7
PCDHGB1Q9Y5G3 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
PCDHGB1Q9Y5G3 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PCDHGB1Q9Y5G3 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
PCDHGB1Q9Y5G3 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
PCDHGB1Q9Y5G3 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC19.45■□□□□ 0.7
PCDHGB1Q9Y5G3 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC19.45■□□□□ 0.7
PCDHGB1Q9Y5G3 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
PCDHGB1Q9Y5G3 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
PCDHGB1Q9Y5G3 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC19.45■□□□□ 0.7
PCDHGB1Q9Y5G3 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PCDHGB1Q9Y5G3 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC19.45■□□□□ 0.7
PCDHGB1Q9Y5G3 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC19.45■□□□□ 0.7
PCDHGB1Q9Y5G3 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC19.45■□□□□ 0.7
PCDHGB1Q9Y5G3 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
PCDHGB1Q9Y5G3 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PCDHGB1Q9Y5G3 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PCDHGB1Q9Y5G3 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC19.45■□□□□ 0.7
PCDHGB1Q9Y5G3 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
PCDHGB1Q9Y5G3 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
PCDHGB1Q9Y5G3 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
PCDHGB1Q9Y5G3 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PCDHGB1Q9Y5G3 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
PCDHGB1Q9Y5G3 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PCDHGB1Q9Y5G3 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC19.44■□□□□ 0.7
PCDHGB1Q9Y5G3 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PCDHGB1Q9Y5G3 AL031848.2-201ENST00000607670 837 ntBASIC19.44■□□□□ 0.7
PCDHGB1Q9Y5G3 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
PCDHGB1Q9Y5G3 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PCDHGB1Q9Y5G3 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
PCDHGB1Q9Y5G3 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PCDHGB1Q9Y5G3 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
PCDHGB1Q9Y5G3 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PCDHGB1Q9Y5G3 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
PCDHGB1Q9Y5G3 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
PCDHGB1Q9Y5G3 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
PCDHGB1Q9Y5G3 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
PCDHGB1Q9Y5G3 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC19.43■□□□□ 0.7
PCDHGB1Q9Y5G3 GABARAPL3-202ENST00000624044 1851 ntBASIC19.43■□□□□ 0.7
PCDHGB1Q9Y5G3 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PCDHGB1Q9Y5G3 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC19.43■□□□□ 0.7
PCDHGB1Q9Y5G3 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PCDHGB1Q9Y5G3 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PCDHGB1Q9Y5G3 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC19.43■□□□□ 0.7
PCDHGB1Q9Y5G3 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC19.43■□□□□ 0.7
PCDHGB1Q9Y5G3 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
PCDHGB1Q9Y5G3 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC19.43■□□□□ 0.7
PCDHGB1Q9Y5G3 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PCDHGB1Q9Y5G3 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms