Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC20.9■□□□□ 0.94
PCDHB11Q9Y5F2 SMUG1P1-201ENST00000590640 811 ntBASIC20.9■□□□□ 0.94
PCDHB11Q9Y5F2 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC20.9■□□□□ 0.94
PCDHB11Q9Y5F2 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC20.9■□□□□ 0.94
PCDHB11Q9Y5F2 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PCDHB11Q9Y5F2 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PCDHB11Q9Y5F2 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.94
PCDHB11Q9Y5F2 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.94
PCDHB11Q9Y5F2 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
PCDHB11Q9Y5F2 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC20.89■□□□□ 0.94
PCDHB11Q9Y5F2 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.94
PCDHB11Q9Y5F2 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
PCDHB11Q9Y5F2 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
PCDHB11Q9Y5F2 AC080038.3-201ENST00000623346 1952 ntBASIC20.89■□□□□ 0.93
PCDHB11Q9Y5F2 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
PCDHB11Q9Y5F2 GALNS-213ENST00000569433 723 ntTSL 3 BASIC20.89■□□□□ 0.93
PCDHB11Q9Y5F2 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC20.89■□□□□ 0.93
PCDHB11Q9Y5F2 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
PCDHB11Q9Y5F2 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
PCDHB11Q9Y5F2 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC20.89■□□□□ 0.93
PCDHB11Q9Y5F2 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
PCDHB11Q9Y5F2 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC20.89■□□□□ 0.93
PCDHB11Q9Y5F2 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
PCDHB11Q9Y5F2 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
PCDHB11Q9Y5F2 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PCDHB11Q9Y5F2 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
PCDHB11Q9Y5F2 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PCDHB11Q9Y5F2 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
PCDHB11Q9Y5F2 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PCDHB11Q9Y5F2 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PCDHB11Q9Y5F2 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC20.88■□□□□ 0.93
PCDHB11Q9Y5F2 TK2-208ENST00000545043 1120 ntTSL 2 BASIC20.88■□□□□ 0.93
PCDHB11Q9Y5F2 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC20.88■□□□□ 0.93
PCDHB11Q9Y5F2 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PCDHB11Q9Y5F2 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
PCDHB11Q9Y5F2 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PCDHB11Q9Y5F2 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC20.88■□□□□ 0.93
PCDHB11Q9Y5F2 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
PCDHB11Q9Y5F2 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PCDHB11Q9Y5F2 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC20.88■□□□□ 0.93
PCDHB11Q9Y5F2 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC20.88■□□□□ 0.93
PCDHB11Q9Y5F2 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC20.88■□□□□ 0.93
PCDHB11Q9Y5F2 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
PCDHB11Q9Y5F2 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
PCDHB11Q9Y5F2 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PCDHB11Q9Y5F2 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC20.87■□□□□ 0.93
PCDHB11Q9Y5F2 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
PCDHB11Q9Y5F2 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC20.87■□□□□ 0.93
PCDHB11Q9Y5F2 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
PCDHB11Q9Y5F2 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC20.87■□□□□ 0.93
PCDHB11Q9Y5F2 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PCDHB11Q9Y5F2 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PCDHB11Q9Y5F2 AC092053.2-201ENST00000640557 1818 ntBASIC20.87■□□□□ 0.93
PCDHB11Q9Y5F2 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC20.87■□□□□ 0.93
PCDHB11Q9Y5F2 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PCDHB11Q9Y5F2 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
PCDHB11Q9Y5F2 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
PCDHB11Q9Y5F2 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC20.86■□□□□ 0.93
PCDHB11Q9Y5F2 GAS2L1P2-201ENST00000436355 1356 ntBASIC20.86■□□□□ 0.93
PCDHB11Q9Y5F2 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC20.86■□□□□ 0.93
PCDHB11Q9Y5F2 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PCDHB11Q9Y5F2 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PCDHB11Q9Y5F2 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PCDHB11Q9Y5F2 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC20.86■□□□□ 0.93
PCDHB11Q9Y5F2 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
PCDHB11Q9Y5F2 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PCDHB11Q9Y5F2 BX005040.4-201ENST00000637145 1518 ntBASIC20.86■□□□□ 0.93
PCDHB11Q9Y5F2 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC20.86■□□□□ 0.93
PCDHB11Q9Y5F2 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
PCDHB11Q9Y5F2 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PCDHB11Q9Y5F2 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PCDHB11Q9Y5F2 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
PCDHB11Q9Y5F2 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
PCDHB11Q9Y5F2 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PCDHB11Q9Y5F2 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PCDHB11Q9Y5F2 COX20-201ENST00000366528 568 ntTSL 2 BASIC20.85■□□□□ 0.93
PCDHB11Q9Y5F2 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
PCDHB11Q9Y5F2 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
PCDHB11Q9Y5F2 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PCDHB11Q9Y5F2 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
PCDHB11Q9Y5F2 DENND3-207ENST00000518347 850 ntTSL 2 BASIC20.85■□□□□ 0.93
PCDHB11Q9Y5F2 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC20.85■□□□□ 0.93
PCDHB11Q9Y5F2 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC20.85■□□□□ 0.93
PCDHB11Q9Y5F2 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC20.85■□□□□ 0.93
PCDHB11Q9Y5F2 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
PCDHB11Q9Y5F2 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
PCDHB11Q9Y5F2 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PCDHB11Q9Y5F2 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
PCDHB11Q9Y5F2 MYB-221ENST00000527615 2381 ntTSL 5 BASIC20.85■□□□□ 0.93
PCDHB11Q9Y5F2 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PCDHB11Q9Y5F2 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
PCDHB11Q9Y5F2 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC20.84■□□□□ 0.93
PCDHB11Q9Y5F2 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC20.84■□□□□ 0.93
PCDHB11Q9Y5F2 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC20.84■□□□□ 0.93
PCDHB11Q9Y5F2 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
PCDHB11Q9Y5F2 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
PCDHB11Q9Y5F2 AC006015.1-201ENST00000429970 570 ntBASIC20.84■□□□□ 0.93
PCDHB11Q9Y5F2 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
PCDHB11Q9Y5F2 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC20.84■□□□□ 0.93
PCDHB11Q9Y5F2 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC20.84■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 17.2 ms