Protein–RNA interactions for Protein: Q9Y3I0

RTCB, tRNA-splicing ligase RtcB homolog, humanhuman

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCBQ9Y3I0 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
RTCBQ9Y3I0 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC27.19■■□□□ 1.94
RTCBQ9Y3I0 BET1L-207ENST00000529614 560 ntTSL 5 BASIC27.19■■□□□ 1.94
RTCBQ9Y3I0 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
RTCBQ9Y3I0 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC27.19■■□□□ 1.94
RTCBQ9Y3I0 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
RTCBQ9Y3I0 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC27.19■■□□□ 1.94
RTCBQ9Y3I0 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
RTCBQ9Y3I0 LINC00526-201ENST00000581067 1875 ntBASIC27.19■■□□□ 1.94
RTCBQ9Y3I0 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC27.18■■□□□ 1.94
RTCBQ9Y3I0 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC27.18■■□□□ 1.94
RTCBQ9Y3I0 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
RTCBQ9Y3I0 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
RTCBQ9Y3I0 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC27.18■■□□□ 1.94
RTCBQ9Y3I0 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC27.18■■□□□ 1.94
RTCBQ9Y3I0 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC27.18■■□□□ 1.94
RTCBQ9Y3I0 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC27.18■■□□□ 1.94
RTCBQ9Y3I0 AC091874.3-201ENST00000512672 1195 ntBASIC27.18■■□□□ 1.94
RTCBQ9Y3I0 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC27.18■■□□□ 1.94
RTCBQ9Y3I0 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC27.18■■□□□ 1.94
RTCBQ9Y3I0 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC27.18■■□□□ 1.94
RTCBQ9Y3I0 AC120498.10-201ENST00000621827 505 ntBASIC27.18■■□□□ 1.94
RTCBQ9Y3I0 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC27.18■■□□□ 1.94
RTCBQ9Y3I0 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
RTCBQ9Y3I0 ANOS2P-203ENST00000472227 1816 ntBASIC27.18■■□□□ 1.94
RTCBQ9Y3I0 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC27.17■■□□□ 1.94
RTCBQ9Y3I0 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC27.17■■□□□ 1.94
RTCBQ9Y3I0 GAS7-202ENST00000396115 929 ntTSL 5 BASIC27.17■■□□□ 1.94
RTCBQ9Y3I0 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC27.17■■□□□ 1.94
RTCBQ9Y3I0 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC27.17■■□□□ 1.94
RTCBQ9Y3I0 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC27.17■■□□□ 1.94
RTCBQ9Y3I0 AC006058.3-201ENST00000606217 1069 ntBASIC27.17■■□□□ 1.94
RTCBQ9Y3I0 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC27.17■■□□□ 1.94
RTCBQ9Y3I0 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
RTCBQ9Y3I0 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
RTCBQ9Y3I0 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
RTCBQ9Y3I0 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
RTCBQ9Y3I0 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
RTCBQ9Y3I0 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC27.16■■□□□ 1.94
RTCBQ9Y3I0 AL158047.1-201ENST00000445918 881 ntBASIC27.16■■□□□ 1.94
RTCBQ9Y3I0 MMAB-206ENST00000540016 945 ntTSL 3 BASIC27.16■■□□□ 1.94
RTCBQ9Y3I0 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC27.16■■□□□ 1.94
RTCBQ9Y3I0 AC008175.2-201ENST00000612840 297 ntBASIC27.16■■□□□ 1.94
RTCBQ9Y3I0 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
RTCBQ9Y3I0 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
RTCBQ9Y3I0 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC27.15■■□□□ 1.94
RTCBQ9Y3I0 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC27.15■■□□□ 1.94
RTCBQ9Y3I0 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC27.15■■□□□ 1.94
RTCBQ9Y3I0 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
RTCBQ9Y3I0 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC27.15■■□□□ 1.94
RTCBQ9Y3I0 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC27.15■■□□□ 1.94
RTCBQ9Y3I0 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC27.15■■□□□ 1.94
RTCBQ9Y3I0 ISCU-212ENST00000547005 795 ntTSL 3 BASIC27.15■■□□□ 1.94
RTCBQ9Y3I0 AC142381.4-202ENST00000563973 229 ntBASIC27.15■■□□□ 1.94
RTCBQ9Y3I0 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
RTCBQ9Y3I0 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC27.15■■□□□ 1.94
RTCBQ9Y3I0 AC092068.2-201ENST00000590491 1708 ntBASIC27.15■■□□□ 1.94
RTCBQ9Y3I0 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC27.15■■□□□ 1.94
RTCBQ9Y3I0 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC27.15■■□□□ 1.94
RTCBQ9Y3I0 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.94
RTCBQ9Y3I0 THRA-202ENST00000394121 2260 ntTSL 2 BASIC27.14■■□□□ 1.94
RTCBQ9Y3I0 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC27.14■■□□□ 1.94
RTCBQ9Y3I0 AC128676.1-201ENST00000454392 318 ntBASIC27.14■■□□□ 1.94
RTCBQ9Y3I0 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC27.14■■□□□ 1.94
RTCBQ9Y3I0 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC27.14■■□□□ 1.94
RTCBQ9Y3I0 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC27.13■■□□□ 1.93
RTCBQ9Y3I0 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
RTCBQ9Y3I0 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC27.13■■□□□ 1.93
RTCBQ9Y3I0 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC27.13■■□□□ 1.93
RTCBQ9Y3I0 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC27.13■■□□□ 1.93
RTCBQ9Y3I0 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC27.13■■□□□ 1.93
RTCBQ9Y3I0 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC27.13■■□□□ 1.93
RTCBQ9Y3I0 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC27.13■■□□□ 1.93
RTCBQ9Y3I0 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC27.13■■□□□ 1.93
RTCBQ9Y3I0 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC27.13■■□□□ 1.93
RTCBQ9Y3I0 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC27.13■■□□□ 1.93
RTCBQ9Y3I0 AC010980.2-201ENST00000587099 1412 ntBASIC27.13■■□□□ 1.93
RTCBQ9Y3I0 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
RTCBQ9Y3I0 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC27.13■■□□□ 1.93
RTCBQ9Y3I0 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC27.13■■□□□ 1.93
RTCBQ9Y3I0 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
RTCBQ9Y3I0 BAALC-201ENST00000297574 801 ntTSL 3 BASIC27.12■■□□□ 1.93
RTCBQ9Y3I0 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC27.12■■□□□ 1.93
RTCBQ9Y3I0 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
RTCBQ9Y3I0 AL596275.1-201ENST00000423464 877 ntBASIC27.12■■□□□ 1.93
RTCBQ9Y3I0 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC27.12■■□□□ 1.93
RTCBQ9Y3I0 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC27.12■■□□□ 1.93
RTCBQ9Y3I0 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC27.12■■□□□ 1.93
RTCBQ9Y3I0 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC27.11■■□□□ 1.93
RTCBQ9Y3I0 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC27.11■■□□□ 1.93
RTCBQ9Y3I0 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
RTCBQ9Y3I0 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
RTCBQ9Y3I0 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC27.11■■□□□ 1.93
RTCBQ9Y3I0 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC27.11■■□□□ 1.93
RTCBQ9Y3I0 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC27.11■■□□□ 1.93
RTCBQ9Y3I0 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC27.11■■□□□ 1.93
RTCBQ9Y3I0 AL162412.1-201ENST00000567129 965 ntBASIC27.11■■□□□ 1.93
RTCBQ9Y3I0 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC27.11■■□□□ 1.93
RTCBQ9Y3I0 INO80E-214ENST00000620599 515 ntTSL 2 BASIC27.11■■□□□ 1.93
RTCBQ9Y3I0 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC27.11■■□□□ 1.93
Retrieved 100 of 98,524 protein–RNA pairs in 18 ms